Aegilops tauschii (wheat D): 109748940
Help
Entry
109748940 CDS
T04345
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats00040
Pentose and glucuronate interconversions
ats01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109748940
Enzymes [BR:
ats01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109748940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109748940
NCBI-ProteinID:
XP_020163535
LinkDB
All DBs
Position
7:complement(467014248..467016132)
Genome browser
AA seq
444 aa
AA seq
DB search
MEGFQWSRPVSLLLYAVFFLAAAAVSEANIGEFDEYWQRRQLEARARAEAAYHPNPIEVA
NSLNRAVHRAVREESGSRRKLLGLHKKFAGPCQATNPIDRCWRCRDDWATDRMRLARCAQ
GFGRHATGGLGGKIYIVTDGSDDDVLEPRPGTLRWAVIQNEPLWIIFARPMLIKLKEELL
VGSNKTIDGRGGQLRIADGAQVTVQYAHNVIIHNIHVNDLIVGKGGRIRDSPQHAGFRTQ
SDGDGVSVFGSTDVWLDHLSLATCQDGLIDVIDQSTGVTISNCHLTNHNDVMLFGSSDSN
PKDEIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKNPTIISQGNR
YIAPPNLAAKLITKRLYAEEAEWKNWVWHSEGDLMLNDAVFADSGGPNQRKFEKDDLIPP
KPGSYVTRLTRFAGCLPCKPGKPC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggggttccagtggagcaggcccgtctccttgctcctgtacgccgtcttcttcctg
gcggcggcggccgtgtcggaggccaacatcggcgagttcgacgagtactggcagcggcgc
cagctggaggccagagcccgcgcggaggccgcctaccatcccaaccccatcgaggtcgcc
aacagcttgaaccgcgccgtccacagagccgttcgggaggagagtgggtcgaggaggaag
ttgctgggactgcacaagaagttcgccgggccgtgccaggcgacgaacccgatcgaccgg
tgctggcggtgccgcgacgactgggcgacggaccggatgcgtctggcgcggtgcgcgcag
gggttcgggaggcacgccacgggcgggctgggtgggaagatctacatcgtcacggacggc
agcgacgacgacgtgctggagccgcggccgggcacgctccggtgggccgtgatccagaat
gagcccctgtggatcatcttcgccaggcccatgctgatcaagctcaaggaggagctgctg
gtcggcagcaacaagaccatcgacggccgcggcgggcagctgcgcatcgccgacggcgcg
caggtgaccgtgcagtacgcgcacaacgtgatcatccacaacatccacgtgaacgacctc
atcgtgggcaagggcggcaggatccgggactcgccgcagcacgccgggttccgcacccag
tccgacggcgacggcgtgagcgtcttcggctccaccgacgtgtggctcgaccacctctcc
ctcgccacctgccaggacggcctcatcgacgtcatcgaccagtccaccggcgtcaccatc
tccaactgccacctcaccaaccacaacgacgtcatgctcttcggctccagcgacagcaac
cccaaggacgagatcatgcagatcaccgtcgccttcaaccacttcggaagaggcctcgtg
cagagaatgccaaggtgccgatggggattcttccacgtggtgaacaacgactacacccac
tggctcatgtacgccatcggcggcagcaagaacccgaccatcatcagccaggggaaccgc
tacatcgcgccgccgaacctggcggcgaagctgatcacgaagcggctgtacgcggaggag
gcggagtggaagaactgggtgtggcactcggagggggacctgatgctcaacgacgccgtc
ttcgccgacagcggcggccccaaccagaggaagttcgagaaggatgacctcatcccgccc
aagccgggatcgtacgtcaccaggctcacgcgcttcgccggctgcttgccgtgcaagccc
ggcaagccctgctaa
DBGET
integrated database retrieval system
