Aegilops tauschii (wheat D): 109749698
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Entry
109749698 CDS
T04345
Name
(RefSeq) uncharacterized protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109749698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109749698
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109749698
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109749698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
109749698
NCBI-ProteinID:
XP_020164234
LinkDB
All DBs
Position
1:complement(313128997..313149120)
Genome browser
AA seq
2391 aa
AA seq
DB search
MIPFNSAVADEVRSLVQGADGSTVDSIYRELCQLADCSPDGCILLLQVCLDEVLLNAGVA
KYSQSKQDLLSTVFRYCLDKPYFSTCFCEALRTLSVSDVFLETLSNELDLSRAERVGIGL
ALSDAENIGLNLKGQRFSIAQIEELCKNPAQPISNDQIHDIVVFLHQTDGLSKHMDSFTN
IISLFKVKEMPFHVPVLVQDSNVRPASSHMDMYIGSFDDDFDSLLSEIGKEISMADIITE
LGYGCTADIAHCKDTLSLFEPLDDLGISKLLGAVVTTAAGLGEAHNTYSTFISAFGNSQT
NDSFQSTAWDINVLVDSINEIAPRTNWTSVMENLDHEGFSIPDEGAFRLLMSIYSRACRD
PFPLHAICGSLWKNLEGQLSFLKHAVAAPADTFTFKHSSRKLVFPDLANHIQGNQAWYCL
DLLEVLCQLADLGYATLVRPLLDYPLSHCPDVLLLGVSQINTAYNLLQYEVLSCVFPALL
KDTKNSSLMNYLWHLNPSLTLRGFVDAHSDIICLLRTVDICQDLKILSAVLDSTPLAFSI
KLATVSFQNDHSNLEKWIIEKFSAHREAFIEECVKFLKESVVNTTHDAAEGVIQQPQATI
TNICWESCPLFIKVLQSHSGQLLTNQLVDELNRVEAAYESRTQGSLGRDIPTSEGGSDDI
EAQANIYFHQMFSEQISIDAMIQMLARFKESTNKRELAIFNCMISNLFEEYKFFPKYPDT
QLKLAAVLMGSLIKHQLVAHLGLGVALRSVLDALRKSIDSKMFMFGTTALEQFMDRVIEW
PQYCNHILQISHLRGTHAELVSAIEQALAKISSSQNEPNIGNIFSVDPHGSGSPSIGNTE
VSDASWQFTNPTPAQLERSPSSFPLQQRYQGFLGERSKGSTNSVQAKNILSISQPTASTP
GDLSMAPKVTAPPSLQASPHHSATISASSQSTNFLRPRSSAPSGTRSPYTTGFGAALNIE
TLVAAAERRDTSVEAPPSEVQDKIFFMINNISNSNLDAKAREFNEVSQDQYYPWFAQYMV
MKRASIEPNFHDLYLKFFDKVNSKTLNKEMVKATYENCKALLQSDLIKSSSEERSLLKNL
GSWLGKLTIGRNQTLRAKEIDPKILIVEAYERGLMIAVIPFTSKILEPCHSSIAYRPPNP
WTMGILSLLAEIYNLPNLKMNLKFDIEVLFKNLSVDMKDVKPSSLLKDRTRQLEGNPDFS
NKDVTASQTPVVAEVSSGMVPAKNVVEVQPELTSTSRATSIPNMLNQYAPPLRLPPNSMV
EDDKVALIMPDQVSPSQTPSPLPALFTLSQLMAAIPRADIYFRINEKLSSLGSLQYSKIM
DVALDKAIKEIIGPVIQRSVTIATRTTKELILKDLAMESDDSAVSRAAHLMVGTLAGSLA
HVTSKEPLRVALSSHLRSLIQNLNNNSETTEQIVHILINDNLDLGCALIETVATRKAVEM
IDGEIKHPFSQLRRQKELLGSGYYDAFPYTQGLARVPDALRPKPTGHLCASQQRVYEDFI
TVWHSQSSQNAGATTSATAVTAAPGNSSIPRLYSPNLVQPADLVPEESDHGTTQLLSVST
QIGTSDTFAQAGGTTNIASVFPPMSSNDIPMGESTAGTKDLGSMVPLSPTTAVDRMESVF
AEPLSTDNGLDRYHQVAQKLEALIANDGKDVEIQSVIAEVPDILHRCVKRDEAALLIAQK
VFRSLYENASKSTYVTWLLATLAAIRDVCKLIAKEITSWVIYSEEENKFNLDIVTGLIRS
EILNLGDYDVHLAKIIDSGRNKTATEFAISLVQTLITQEPSGVSELCNVVDALSKLAIRP
GSPESLQQLIEIAKSNFKNAASFAAMKDEKVLSGRPSSVYKEENDSAFADAVSFQDQVAV
LFSDWCHICDHPTMGDSAYSHYIVQLQQHGLLKGDDLTDRFFHTLTELAITHAVVSEQVI
APGGMSQQPAQQLQISYFSIDSYSKLVTLMFKYGVDLGPNKGSLLLKILSITTRIIQKDA
EEKKVSFNPRPYFRLFINLLSELSTADLHDGASFQVLTAFANAFHVLQPLRVPAWSFAWL
ELVSHRSFMPKLLLCNSQKGWPFFQRLLGDLFKFMEPYLRNAELGQPIQLLYKGTLRVLL
VLLHDFPEFLCDYHFSFCDVIPPSCIQMRNVILSAFPRNMRLPDPSTPNLKIDLLAEISV
APRIMSDVEGALKAKQMKTQVDEYLKRPEGSSFLTDLKQKLVLPPNEANVAGTRYNVPLI
NSLVVYVGIQAVQQLQHNKANASASAQQMNQSPQVDVFQIETATEVYRNLIVNMDTEGRY
LLLNAIANQLRYPNNHTHYFSFIILYLFAEATQDIVQEQITRVLLERLIVNRPHPWGLLI
TFIELIKNPRYSFWARSFTRCAPEIERLFESVARSCGGKAAEEGVLADGGH
NT seq
7176 nt
NT seq
+upstream
nt +downstream
nt
atgatccccttcaattccgccgtcgccgacgaggtccgctccctcgtccagggcgccgac
ggctctaccgtcgactccatctaccgcgagctctgccagttagctgactgcagtcctgat
ggttgcattttactgcttcaagtttgtttggatgaggtgctgctgaatgccggggtggca
aaatactctcaatcgaaacaagatcttttatccaccgttttcagatattgtctggataaa
ccatacttcagcacctgtttttgtgaagcactgaggactttgtctgtcagtgatgttttc
cttgaaacgttgtcaaatgaacttgatctatccagagctgagagggttggtattggactt
gccctgtcagatgccgagaatataggcttgaatctgaaaggccaaagattttcaattgct
caaatcgaggagttatgtaaaaatcctgcacagcctatatcgaatgaccaaattcatgat
attgttgtgtttcttcaccagactgatggcctctcaaagcatatggattcttttactaac
attatttccctattcaaagtcaaagagatgccattccatgtccctgtccttgttcaggac
agcaatgttcggccagcttcaagccacatggatatgtacatcggtagctttgatgatgat
tttgattcccttttatctgaaatcgggaaggagataagcatggctgacatcattactgaa
ttgggttatggatgtactgctgatattgcacattgtaaagatacattatcactttttgag
cctcttgatgatttgggaatatctaagttgcttggggctgttgttactactgccgctggt
cttggtgaggctcataacacatattcaacattcatttcggcttttggcaacagccaaaca
aatgactcatttcagtcaacggcatgggatatcaatgttctcgtggactcaatcaatgaa
attgccccacgaacaaattggacaagtgtaatggaaaacctggaccacgagggtttcagt
atccctgatgaaggggctttccgtctattgatgtcgatatattctcgggcttgcagggat
ccatttccgcttcatgccatctgtgggtcactctggaagaatttagaagggcaattatca
ttcttgaaacatgcagtggctgccccagcagatacatttacatttaaacattcttccagg
aagctggtatttccagacttggctaatcatatccaaggcaatcaggcttggtactgccta
gaccttttggaggtgttatgccagcttgctgaccttggctatgcaacattagtgcgaccg
ctgctggactacccactcagtcattgtccagacgtcttacttcttggcgttagccaaatc
aatactgcatacaatctcctccagtatgaagtattgtcatgcgtattccctgctttattg
aaggacactaaaaatagcagtctaatgaactatctctggcatctcaacccttcccttact
ctccgaggatttgttgatgctcattctgatataatttgtcttttgagaactgttgatata
tgtcaagacctaaagatcctatccgctgtccttgattccactcccttagcatttagcatc
aaacttgccacagtttcctttcaaaacgatcatagcaatctagagaaatggattatcgag
aagttcagtgcacacagagaggcttttattgaggaatgtgttaaattcttgaaagaaagt
gtggtcaacacaactcatgatgctgcagagggtgtcatccaacaacctcaagctactatc
acgaatatttgctgggaatcatgtcctttatttataaaggttcttcagtctcactctgga
caactgttgactaaccaactggtggatgaactaaatagagtggaagcagcgtatgaatca
aggactcaaggttctcttggaagggacattcctacttccgagggaggttctgatgacatt
gaagcacaggcaaatatatattttcaccagatgttttctgaacagatcagcattgatgct
atgatacaaatgcttgcacgcttcaaagagtctacaaacaagagggagctagcaattttc
aattgcatgatctcaaacttgttcgaagagtacaagttcttcccaaagtatccagataca
cagcttaagctagctgctgttcttatgggctctctcattaaacatcaacttgtggctcac
ctgggacttggagttgctctacgtagtgttcttgatgccctgcgtaaatctattgattca
aagatgtttatgttcggcacgacagcgctcgagcagtttatggatcgtgtaatagagtgg
ccgcaatactgcaaccacatattgcagatctcacatcttcgtggaacacatgccgaatta
gtctctgcaattgagcaggcacttgccaagatatcatcaagtcaaaacgaaccaaatatt
ggcaacatattttctgtggatccgcatggttctggttcaccatctatcggaaacacagag
gtttctgacgcatcatggcagttcaccaatccgactccagcacagcttgaacggtcacct
tcttcttttccactgcaacagaggtaccagggttttcttggggagaggtccaaaggttct
acaaacagcgtccaagctaagaacattctatctatcagtcaacctactgcttcaacacct
ggtgatttgtctatggctccgaaggttaccgcaccaccatccttacaagcttctcctcat
cattctgccactatttcagcctcttcacaatccactaattttctgaggcctagaagttca
gctccttcaggcactcgatctccatacactacaggatttggagctgctttaaatattgaa
actcttgttgctgccgcagaacgaagagatacgtcagttgaggcccctccatctgaagtt
caagacaagatattcttcatgatcaacaatatttccaattctaatttggatgctaaggca
agggaatttaatgaggtttctcaggatcagtattatccttggtttgcgcaatacatggtc
atgaaaagggcaagcatcgaaccgaattttcatgacttgtatttgaagttcttcgacaaa
gttaactcaaaaacgttgaataaggaaatggtgaaagctacatatgagaactgcaaggct
ttgttgcaatcggatcttatcaaatcaagttccgaagagcgttcgttgctaaaaaatctg
ggtagttggctaggaaagctcaccataggaaggaatcaaacgttacgagcgaaggaaatt
gatcccaaaattcttatagttgaggcatatgaaagggggctgatgatcgcggtcattcca
ttcacttcaaagattcttgaaccttgccattcaagtatagcatatcgtcctccaaatcca
tggacaatgggtattcttagcctacttgctgagatctataatctacctaatctcaagatg
aacctgaagtttgacattgaggtcttgtttaagaacctcagtgtggacatgaaagatgta
aaaccatcttctcttcttaaagatcgtactcgtcaacttgaaggaaatccggatttttct
aataaagatgtcactgcatctcaaacaccagtcgttgcagaggtttcctctggtatggtc
ccagcaaaaaatgttgttgaagtgcaaccagagttaactagtacctcacgggctactagc
atcccaaatatgttaaaccagtatgcaccacctcttcgtcttcctccaaacagcatggtt
gaagatgataaggttgctttaataatgcccgatcaggtttcaccatctcaaacgccgtct
ccattaccggctttgtttactcttagtcagcttatggcagcaatacctcgcgcggatata
tattttagaattaatgaaaagcttagttctcttggctcactgcaatatagcaaaatcatg
gatgttgctttggataaggctattaaagaaattataggccccgttattcaaagaagtgtt
acaatagctacccgaactactaaggagcttattcttaaggatttagcaatggaatctgat
gatagtgcggtatctcgcgctgcacatttgatggttggcacgctagctgggagtctagct
catgtaacttccaaggagcctcttcgtgttgctttgtcgtctcatcttcgaagtcttatt
cagaacctgaacaataacagtgaaaccactgagcagattgttcatattctgatcaatgat
aatctagatcttggatgtgcgctaatagagactgttgcaacacgcaaggctgttgagatg
atcgatggagaaatcaagcatcctttttcacagctaaggaggcaaaaggagttgcttggt
tctggatattatgatgcttttccttacactcaaggtcttgcacgtgtcccggatgcactt
cgtccaaagcctactggccatttgtgtgctagccaacaacgagtgtatgaggacttcatt
actgtatggcacagccagagtagtcaaaatgctggagctaccacttctgctacagccgtg
actgctgcaccaggcaattccagtatacctcgactttatagcccaaatttggtacaacca
gcagatctggttcctgaagagtcagatcatggtaccacacaacttttaagtgtttccaca
caaattggtacaagtgacacttttgcccaagctggtggaactactaacattgcatctgtt
ttcccccctatgtcatctaatgacattccaatgggtgaatcaacagctggaactaaagat
cttggctctatggtgcctctttcacctacaactgctgttgaccgtatggaatctgttttt
gctgaacctttgagtactgacaacggattagacagataccatcaagttgcacagaagctt
gaagccttgattgccaatgatggtaaagatgtagaaattcagtctgttattgcagaagtt
cctgatattttacacagatgtgttaagcgggatgaagctgcattattgattgcacaaaag
gttttcagaagtttgtatgaaaatgcatcaaagagtacttatgtcacatggcttctggca
actttagctgcaatacgtgatgtttgcaaacttatcgctaaagagataacaagctgggta
atttattctgaggaagaaaataagtttaacctcgacatagttactggactaattcgttcc
gagattcttaatcttggggattatgatgttcatctagcaaagatcattgatagtggaaga
aacaagactgcaacagagttcgctatatcacttgtccagacattgattacccaagaaccc
agtggcgtttctgagctttgtaatgttgttgatgcattatcgaagcttgcaatcaggcct
ggttcacctgaatcattgcagcagttgattgagattgcaaagagtaatttcaagaacgct
gctagctttgccgccatgaaggatgaaaaggttttatctggccgtccttcatcagtatat
aaagaagaaaatgattctgcttttgcagatgctgttagttttcaagaccaggttgcagtt
ttattctcggactggtgtcacatatgtgatcatccaactatgggtgattcagcatatagt
cattacattgtgcagttgcaacaacatggcttgcttaagggagatgatttgactgaccgc
ttcttccatactctcacggaacttgccatcacacatgctgttgtctctgagcaagttatt
gctcctggtgggatgtctcagcagccggcccagcaactccagatttcatatttctcaatt
gattcatactcgaagcttgtgactttaatgttcaagtatggcgtggatttaggaccaaac
aaaggcagccttcttctgaagattctctccataaccactaggatcattcagaaagatgct
gaagaaaagaaagtttctttcaatcctcggccatattttagattatttataaatttgcta
agtgagcttagcactgctgaccttcatgatggtgctagttttcaggttttgactgcattt
gcaaatgcttttcatgtgcttcaacccttgagagttcctgcatggagttttgcttggctt
gaattggtaagccatagaagcttcatgccgaagttattgctgtgcaattcacaaaagggc
tggccattcttccagaggctgcttggtgatttgttcaaatttatggaaccatatctaaga
aacgctgagctgggacagcccattcagcttttatacaaaggaactttgagagtgctgctt
gttctactccatgactttcctgagttcctctgcgactaccacttcagtttctgtgatgtg
attcccccaagctgcattcaaatgcgtaatgttattcttagtgcatttccacgcaatatg
agacttcctgatccctctactcctaatttgaagattgacctgctagctgaaatttcagta
gctccaagaatcatgtctgatgtggaaggtgctttgaaggcaaagcaaatgaagacccag
gttgacgagtacctcaagagaccagaaggttcatcctttttaactgatttaaagcagaag
ttagtgctgcctccaaatgaagcgaatgttgctgggactcgttataatgttcccttaatt
aattcactggtcgtctatgttggcatccaggctgtgcaacagttgcagcataacaaggca
aatgcatcagcatcagcgcagcaaatgaaccaaagtcctcaggtggatgtttttcagatt
gaaacagccactgaggtctacagaaatcttatagtgaatatggataccgaaggccgttac
ctcctcctgaacgcgattgctaaccagctacgctatccaaacaatcatactcactacttc
tccttcatcattttgtacttgtttgctgaggcaacacaggatatcgtacaggagcagata
actagagttcttttagagcgcctaatagttaatcgtcctcatccctggggattacttatt
actttcattgagctcataaagaatccacgctatagcttttgggctcgatcctttacacgc
tgtgcaccggagattgagaggctgtttgagtctgttgcaaggtcttgtggaggtaaagct
gcggaagagggagttctcgctgatggtggtcattag
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integrated database retrieval system
