Agrobacterium fabrum: Atu0018
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Entry
Atu0018 CDS
T00070
Symbol
trpB
Name
(GenBank) tryptophan synthase beta subunit
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00260
Glycine, serine and threonine metabolism
atu00400
Phenylalanine, tyrosine and tryptophan biosynthesis
atu01100
Metabolic pathways
atu01110
Biosynthesis of secondary metabolites
atu01230
Biosynthesis of amino acids
Module
atu_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Atu0018 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Atu0018 (trpB)
Enzymes [BR:
atu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Atu0018 (trpB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
AAK85843
UniProt:
Q8UJB0
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All DBs
Position
circular:15139..16359
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AA seq
406 aa
AA seq
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MNDAPTPNSFRAGPDEDGRFGIYGGRFVAETLMPLILDLQAEWDKAKSDPEFQAELKYLG
THYTGRPSPLYFAERLTAELGGAKIYFKREELNHTGSHKINNCLGQILLAKRMGKTRIIA
ETGAGQHGVASATVAARFGLPCVVYMGATDVARQAPNVFRMKLLGAEVKPVTAGHGTLKD
AMNEALRDWVTNVDDTYYLIGTAAGPHPYPEMVRDFQAVIGEEAKAQMLEAEGRLPDMII
AAVGGGSNAIGIFHPFLDDKNVRIVGVEAGGKGLSGEEHCASITAGSPGVLHGNRTYLLQ
DGDGQIKEGHSISAGLDYPGIGPEHSWLNDIGRVEYVPIMDHEALDAFQMLTRLEGIIPA
LEPSHALAEVIKRAPKMGKDEIILMNLSGRGDKDVHTVSKFLGMDV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgcgccaacacccaattcttttcgtgctggtcccgatgaggacggacgcttc
ggcatttacggaggacgcttcgttgccgaaacgctgatgccgcttatcctggatttgcag
gcggaatgggataaggccaagagcgatcccgagtttcaggccgaactaaaatatctcggc
acgcattacaccggccgcccgagcccgctttatttcgcggagcgtctcacggcggaactt
ggcggcgcgaagatttatttcaagcgcgaagagttgaaccatactggctcgcacaagatc
aacaattgcctcggccagatcctgcttgccaagcgcatgggcaagacccgcatcattgcc
gaaaccggtgcgggccagcacggcgttgcctcggccacggttgctgcacgtttcggcctg
ccttgcgtggtttatatgggcgccactgatgtcgcccgtcaggccccgaacgtatttcgc
atgaagcttctcggcgccgaggtaaagccggtcacggccggccatggcacgctcaaggac
gccatgaacgaggcactgcgtgactgggtcaccaatgtcgacgatacctattacctgatt
ggcaccgcagccggcccgcatccctatccggaaatggtccgtgatttccaggcggttatc
ggcgaggaagccaaggcgcagatgctggaggcggaaggccgcctgccggatatgatcatt
gccgctgtcggcggcgggtcgaacgccatcggcatcttccatccgttcctcgatgacaag
aatgtccgtatcgtcggcgtcgaagccggcggcaagggcctgtctggcgaagaacactgc
gcctcgatcacagccggttcaccgggcgtgctgcatggcaaccgcacctatctgcttcag
gacggtgatggccagatcaaggaaggtcattcgatctccgcaggcctcgattatcccggc
atcgggccagagcattcctggctgaacgatatcggccgcgtcgaatatgtgccgatcatg
gaccatgaggcattggacgccttccagatgttgacccgcctcgaagggatcattccggct
ctggagccaagccacgcgctggccgaagtcatcaagcgcgcgccgaaaatgggcaaggat
gaaatcatcctgatgaacctctccggccgtggcgacaaagatgtccacaccgtcagcaag
ttccttggaatggatgtataa
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