Agrobacterium fabrum: Atu1499
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Entry
Atu1499 CDS
T00070
Symbol
dac
Name
(GenBank) penicillin binding protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00550
Peptidoglycan biosynthesis
atu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Atu1499 (dac)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atu01002
]
Atu1499 (dac)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
atu01011
]
Atu1499 (dac)
Enzymes [BR:
atu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Atu1499 (dac)
Peptidases and inhibitors [BR:
atu01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Atu1499 (dac)
Peptidoglycan biosynthesis and degradation proteins [BR:
atu01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Atu1499 (dac)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AAK87290
UniProt:
Q7CZ43
LinkDB
All DBs
Position
circular:complement(1488694..1489866)
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AA seq
390 aa
AA seq
DB search
MRKAIHRSYRSAIVVAAFAFFSAGAAQSQTAPFIAKAEQAYMIDAETGTVLLSQNEDQSF
PPASLAKLMTVEVVLDALSKGQVTPETAYPVSEYAWRTGGAPSRTSTMFAALKSSVGIND
LLTGIIVQNANDGCIIVAEGMAGSDAAFAKRMTARAGELGMNRSIFSNSTGLPDPGNQTT
ARDMVRLAQHLHDTYPDRYALFTKPDFEWNRIFQRNKNTLLMPGSGIDGLGLGFAEGSGF
AAVVSAEREGRRVYLALAGIADDKTRQEEARRVVDWGLTAFEKRHLFSKDEAVGAVSVYG
GDVSHIDLSPKEDVSVLVPVNNPDRISGRIVYRWPLNAPLDVGANAGTLKIFSGERLLRE
VPLYTKTAVGKGSLTQNATGALKELLLFWL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggccatacatcgctcttaccggtcggccatcgttgtggccgccttcgcattt
ttcagtgcgggtgcggcgcaatcgcagacagcccctttcatcgccaaggctgaacaagcc
tatatgatcgatgccgaaaccggcacggtgcttctttcgcaaaatgaagatcagtccttt
ccgccagcatcgcttgccaagctgatgacggtggaagtggtgcttgatgcgctctccaaa
gggcaggtgacgccggaaacggcctatccggtctcggaatatgcctggcgcacgggcggc
gctccctcgcgcacctccacgatgtttgcggccctgaaatcctcagtcggcatcaacgat
ctgctgaccggcatcatcgtgcagaatgccaatgacggctgcatcatcgtggctgaaggc
atggccggttcggatgccgctttcgccaagcgcatgacagcgcgggcgggcgaacttggc
atgaatcgcagcatattttccaattccacgggacttcccgatcccggcaaccagacgacc
gccagggatatggtgcgtctggcccagcatctgcacgacacctatcccgatcgctacgcg
cttttcaccaagcccgatttcgagtggaaccggattttccagcgcaacaagaacacgctg
ctgatgccgggcagcggcatagatggtctcgggctcggttttgcggagggcagcggtttt
gcagctgtcgtttcagccgaacgggaagggcgccgcgtctatctggcgcttgcaggcatt
gccgatgacaagacgcgacaggaagaagcccgccgggtggtggactggggcctgacggct
ttcgaaaaacgccatcttttcagcaaggatgaagccgtcggcgccgtcagcgtttatggc
ggcgatgtctcgcatatcgatctttcaccgaaggaagatgtcagcgtgctggtgccggtc
aataatccggatcgcatttccggccgcatcgtctatcgctggccgctgaatgcgccgctg
gatgtcggcgcgaacgctggaacactcaagatattttcgggcgaacggctgctgcgtgaa
gtgccgctttatacgaagacggcggtgggcaaaggttcgctcacacagaatgcgacgggc
gcgctgaaggaattgctgctcttctggctgtga
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