Acinetobacter tibetensis: M5E07_14840
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Entry
M5E07_14840 CDS
T08883
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
atz
Acinetobacter tibetensis
Pathway
atz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M5E07_14840 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atz03021
]
M5E07_14840 (rpoB)
03400 DNA repair and recombination proteins [BR:
atz03400
]
M5E07_14840 (rpoB)
Enzymes [BR:
atz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M5E07_14840 (rpoB)
Transcription machinery [BR:
atz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M5E07_14840 (rpoB)
DNA repair and recombination proteins [BR:
atz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M5E07_14840 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
USE83031
UniProt:
A0AAE9RZW9
LinkDB
All DBs
Position
complement(3085594..3089682)
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPSVMDAPYLLAIQVDSYRTFLQDGKSPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYSNEQILDLFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDITDNEGKVIVEQGKRINARHVRQMEASGLTKLSVPDEYLYERIT
AEDITLRDGDVIAANTLLSHEIMVKLAEGGVKQFNMLFTNDIDRGSFIADSLRADTTTGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSNSDITDVLKTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAEADNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKCNNFGFLETPY
RRVVDGRVTDEVEYLSAIEEVGTVIAQADSAVDAENHLTEEFVSVRHQGDFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLLADKPLVGTGMEANVARD
SGVCVIANRGGAIEYVDASRIVIRVNEEEMIAGEAGVDIYNLIKYTRSNQNTCINQNVVV
RMGDKVARGDVLADGPSTDGGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVAAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDERAQAIEKA
QLDAYRKDLKEEYKIFEEAARERVVRLLTGQESNGGGGTKRGDKMSEDMLSGLELVDLLE
IQPSDEAIAERLTQIQVFLKEKSFEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGEQIDKMLKQQREIAELRIFLDKIYNKVGGQQEDLDSLTDDEILILAGNLRAGVP
LATPVFDGAEEAQIKELLELAEIPRSGQTVLYDGRTGERFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgcctagt
gttatggatgctccgtacttgctcgcgattcaagtcgactcgtacagaacgttcttgcaa
gatggcaaatcaccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctatagaaagttattctggcaatgctgctctagaatttgttgagtatagccttggt
aagccggagtttgatgttcgcgaatgtattcttcgtggctcaacttatgcggcaccaatg
cgtgtaaaaattcgtttgatcattaaagatcgtgaaacgaaatcaatcaaagacgtgcgt
gagcaagaagtgtacatgggtgaaatgccactcatgacggataacgggacattcgttatt
aatggtactgagcgtgtaatcgtatctcagttacatcgttcacctggcgtgttctttgat
catgataagggtaaaactcactcaagcggtaaagtgctttattcagcacgtattattccc
taccgtggttcatggttagattttgaatttgatgcgaaagatttagtctatgttcgtatt
gaccgtcgtcgtaaattgcttgcgactgtggtacttcgtgcattgggttatagcaacgaa
caaattctagacttattctacgagaaagtacctgtctatttagatatgggtagctaccag
attgaccttgttccagaacgcctgcgtggcgaaatggcacaattcgacattaccgataat
gaaggtaaagtgattgttgagcaaggtaaacgtattaacgcgcgtcatgtacgtcaaatg
gaagcttcaggcttaactaagctttctgttccagatgaatacttatatgagcgtatcact
gctgaagatatcactttacgtgatggcgacgtcatcgctgcgaacaccttattaagccat
gaaattatggtgaaattggctgaaggcggcgtgaaacagttcaatatgctgttcacgaat
gacattgaccgtggttcattcattgcagattctttacgtgcagatacaacaacaggtcgt
gaagaagcgcttgttgaaatctacaaagtaatgcgtccaggcgagccaccaacaaaagaa
gctgctgaaaacctattcaataacttgttcttctcttctgagcgttatgatttatcgcca
gtaggtcgtatgaagtttaaccgtcgtttgggtcgtccttacgaagtgggaactgaccag
aagtcacgtgaagttgaaggcattctttcgaacagcgatatcactgatgtattaaaaaca
ttggttgaaattcgtaacggtaaaggtgaagtcgatgatatcgatcacttgggtaaccgt
cgtgttcgttctgttggtgaaatgacagaaaaccaattccgtgttggtttggttcgtgtt
gaacgtgctgtaaaagaacgtttaagccaagcagaagcagacaacttgtctccgcaagat
ttaatcaatgcgaaaccagttgcagctgcaatcaaagaattctttggttcaagccaattg
tctcagtttatggaccaaaacaatccattgtctgagattacgcacaaacgtcgtgtatcg
gcgcttggtcctggtggtttaacacgtgaacgtgcgggctttgaagtacgtgacgtacat
caaactcactatggtcgtgtatgtccgattgaaacgcctgaaggtccaaacattggtttg
atcaactcgctatctgtttatgcaaaatgtaataacttcggtttcttggaaactccatac
cgtagagttgttgatggtcgtgtaacggatgaagttgaatacttatctgcgattgaagaa
gtaggcacagtcattgcacaagccgactctgcagttgatgcagagaatcatttgactgaa
gaatttgtttctgtacgtcaccaaggtgatttcgtacgtatgccgcctgaaaaagtgacg
catatggacgtatctgctcagcaggttgtttctgttgctgcatcactgattccattcctt
gaacacgatgatgcgaaccgtgcattaatgggttcgaacatgcagcgtcaggctgttcca
acattattggctgacaagccgcttgttggtactggtatggaagcaaacgtagcgcgtgac
tcaggtgtgtgtgttatcgcaaaccgtggtggtgcgattgaatacgtggatgcttctcgt
atcgtgattcgtgtaaacgaagaagaaatgattgcgggtgaagcgggcgtagatatctac
aacctcatcaaatatacacgttctaaccaaaatacatgtatcaaccaaaacgttgttgtt
cgcatgggtgacaaagttgctcgtggtgatgtattggctgacggtccatcaactgatggt
ggtgaacttgcgctaggtcaaaacatgcgcgtcgcgttcatgacatggaacggttataac
tatgaagactcgatcttgctttctgagcgtgtacttcaagaagatcgcttaacgtcgatt
catatccaagaattatcgtgtgttgcacgtgataccaaattgggtgctgaagaaattact
gctgatatcccgaatgtgggtgaagctgcactgtctaagctagatgaatcaggtatcgta
tatatcggtgctgaagttgctgcgggtgacattctagtcggtaaagtaacgcctaaaggt
gaaacgcaattaacaccagaagaaaaactgcttcgcgcaatttttggtgaaaaagcggct
gacgttaaagactcttctttacgtgttccatctggcaccaaaggtacagtgattgacgtt
caagtgtttacacgtgacggtcttgaaaaagatgaacgtgcacaagcaattgaaaaagct
caattagatgcttaccgtaaagacttgaaagaagaatacaaaatcttcgaagaagcagca
cgtgaacgtgttgttcgcttgttgacaggtcaagagtcgaatggcggtggcggtacaaaa
cgtggcgacaaaatgtctgaggatatgttgtctggcttagagttggttgatttacttgaa
atccagccaagtgatgaagccattgctgagcgtttaacgcaaattcaagtgttcttgaaa
gagaagagcttcgaaattgacgagaaatttgctgagaaaaaacgcaaactttctacaggt
gacgaacttacaactggcgtattgaaagttgtgaaggtttaccttgcggttaaacgtcgt
atccagcctggtgataagatggcgggtcgtcacggtaacaagggtgttgtttctaacatc
ttgccagttgaagacatgccacatgatgccaatggtgtaccagtcgatatcgtattgaac
ccattgggtgtaccgtcacgtatgaacgtgggtcagattcttgaaactcacttgggtatg
gctgcgaaaggtttgggtgagcaaattgataagatgctcaaacaacagcgtgaaattgct
gaactacgtattttcctagacaagatctacaacaaagtgggcggtcagcaagaagattta
gacagcttaactgatgacgagattctaatcttggcgggtaatttacgcgctggtgtgcct
ttagctactcctgtatttgatggtgctgaagaagctcaaatcaaagagttgctagagctg
gctgaaattccacgctcgggtcaaaccgtattatatgatggacgtacaggtgaacgtttc
gaccgtcctgtaactgtaggttatatgtacatgctcaagttgaaccacttggttgacgac
aagatgcatgcgcgttctactggttcttactcattagtaacgcaacagccattgggtggt
aaagctcagtttggtggtcagcgtttcggtgagatggaggtctgggcacttgaagcttac
ggcgcagcttatacactgcaagaaatgcttactgtgaagtcggatgatgttgaaggtcgt
actcgtatctataagaacattgtagatggtaaccattatatggacccaggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa
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integrated database retrieval system
