Aurantimonas sp. HBX-1: LXB15_08955
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Entry
LXB15_08955 CDS
T07802
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
aub
Aurantimonas sp. HBX-1
Pathway
aub02024
Quorum sensing
aub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LXB15_08955 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LXB15_08955 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aub03019
]
LXB15_08955 (hfq)
03036 Chromosome and associated proteins [BR:
aub03036
]
LXB15_08955 (hfq)
Messenger RNA biogenesis [BR:
aub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LXB15_08955 (hfq)
Chromosome and associated proteins [BR:
aub03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LXB15_08955 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
UIJ73732
LinkDB
All DBs
Position
complement(1891057..1891305)
Genome browser
AA seq
82 aa
AA seq
DB search
MPERTQNLQDLFLNTVRKQKISLTIFLVNGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPSQPVHMHDGGDDDRTD
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacggacgcaaaacctccaggacctcttcctcaacaccgtgcgcaagcagaag
atctcgctgaccatcttcctggtcaacggcgtcaaactgaccggcgtggtgacctccttc
gacaatttctgcgtcctgctgcgccgcgatggccattcccagctggtctacaagcacgcc
atttccaccatcatgccctcccagccggtccatatgcacgacggcggggacgacgacagg
accgactga
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