Acinetobacter ursingii: URS_0710
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Entry
URS_0710 CDS
T06299
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aug
Acinetobacter ursingii
Pathway
aug03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aug00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
URS_0710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aug03021
]
URS_0710
03400 DNA repair and recombination proteins [BR:
aug03400
]
URS_0710
Enzymes [BR:
aug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
URS_0710
Transcription machinery [BR:
aug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
URS_0710
DNA repair and recombination proteins [BR:
aug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
URS_0710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
BBF76748
LinkDB
All DBs
Position
1:complement(704650..708441)
Genome browser
AA seq
1263 aa
AA seq
DB search
MRVKIRLIIKDRETKSIKDVREQEVYMGEMPLMTENGTFVINGTERVIVSQLHRSPGVFF
DHDKGKTHSSGKVLYSARIIPYRGSWLDFEFDAKDLVYVRIDRRRKLLATVILRALGYNN
EQILDLFYEKVPVYLDMGSYQIDLVPERLRGEMAQFDITDNDGKVIVEQGKRINARHVRQ
MEASGLSKLSVPDEYLYERITAEDITLKDGDIIPANTLLSHEVMVKLAEGGVKQFNILYT
NDIDHGPFIADTLRADTTSGREEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLS
PVGRMKFNRRLGRPYEVGTDQKSREVEGILSNEDITDVLRTLVEIRNGKGEVDDIDHLGN
RRVRSVGEMTENQFRVGLVRVERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQ
LSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIG
LINSLSVYAKANDFGFLETPYRKVVDGRVTDDVEYLSAIEEVGTVIAQADSGVDAEGNLV
EEMVSVRHQGEFVRMPPEKVTHMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAV
PTLLADKPLVGTGMEATVARDSGVCVIAKRGGVIEFVDASRVVIRVHENEMIAGEAGVDI
YNLIKYTRSNQNTCINQKVLVNLGDKVGRGDVLADGPSTDGGELALGQNMRVAFMTWNGY
NYEDSILLSERVLQEDRLTSIHIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGI
VYIGAEVTAGDILVGKVTPKGETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVID
VQVFTRDGLEKDDRALAIEKAQLDSYRKDLKEEYKIFEEAARERIVRLLKGQDSNGGGTT
KRGDKLTEDLLSGLELVDLLEIQPSDEGIAERLSQIQVFLKEKSAEIDEKFAEKKRKLAT
GDELTTGVLKVVKVYLAVKRRIQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVL
NPLGVPSRMNVGQILETHLGLAAKGLGEQIDKMLQQQRTIAELRIFLDKIYNKVGGEQED
LNSLTDDEVLVLAGNLRKGVPLATPVFDGAEESQIKELLELAELPRTGQQILFDGRTGEQ
FDRPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEA
YGAAYTLQEMLTVKSDDVEGRTRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELK
NGD
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtaaaaattcgtttgatcattaaagatcgtgaaacgaaatcaattaaagatgtt
cgcgaacaagaagtgtatatgggtgaaatgccactcatgactgagaacggaacatttgtg
attaacggtactgagcgtgtcatcgtatctcagttacaccgttcaccaggtgtgttcttc
gatcatgataaaggtaaaactcattcaagcggtaaagtgctgtattcagcacgtattatt
ccttaccgtggttcatggttagactttgaatttgatgccaaagatttggtttacgtgcgt
attgaccgtcgtcgtaagctattggctacggttattctacgtgcactgggttataacaat
gagcaaatccttgatttgttctatgaaaaagtacctgtgtatctggacatgggcagctac
caaattgatcttgtgcctgaacgtttacgcggtgaaatggcgcagtttgatattactgat
aatgacggtaaagtcattgtagaacaaggcaaacgtattaatgcgcgtcatgttcgtcaa
atggaagcgtctggtctaagcaagctttcagtgcctgatgagtatctgtatgagcgtatc
actgctgaagatattacactaaaagatggtgatatcattcctgccaacactttgctcagc
catgaagtcatggtcaagctagctgaaggcggcgtaaagcagtttaatatcctgtatacc
aacgatatcgatcatggtccgtttattgcggatactttacgtgctgataccacatcaggt
cgtgaagaagcactggttgaaatctacaaggtaatgcgtccaggtgagccaccaacgaaa
gaagcggctgaaaacttgtttaataacttgttcttctcttctgaacgttatgatttgtca
cctgttggtcgtatgaagtttaaccgtcgtttgggtcgtccttacgaagttggtacagat
caaaaatcacgtgaagttgaaggtatcctctctaatgaggatatcactgatgtattacgt
acattggttgagattcgtaacggtaaaggtgaagtcgacgatatcgatcacttgggtaac
cgtcgtgtccgttcagttggtgaaatgacagagaaccagttccgtgtgggtctggtgcgt
gttgaacgtgctgttaaagagcgtttaagccaagctgaaaccgataacttgtctccacaa
gacttgatcaatgcgaaacctgttgctgccgcgatcaaagaattctttggttcaagccaa
ttgtctcagttcatggatcaaaacaacccattgtctgaaattacacacaaacgtcgtgta
tcagcgcttgggccaggtggtttgacacgtgaacgtgcaggctttgaggtacgtgacgta
catcaaactcactatggtcgtgtgtgtccgattgaaacgcctgaaggtccaaacattggt
ttgatcaactcgctatctgtttatgcaaaagccaacgatttcggtttcttggaaacgcct
tatcgtaaggtagtcgatggtcgtgtaacggacgatgttgaatatctttctgcgattgaa
gaagtggggactgtgattgcacaggccgactctggtgttgatgcagagggtaacctcgtt
gaagaaatggtttcagtccgtcatcagggcgaatttgtacgtatgcctcctgaaaaagtg
acgcatatggatgtttctgcgcagcaagttgtttctgtagcagcatcattgattccattc
ctagaacacgatgatgcgaaccgtgccttaatgggttcgaacatgcaacgtcaggcagtg
ccaaccttacttgcggataaaccgcttgtgggtacgggtatggaagcgaccgttgcacgt
gactcaggcgtatgtgtaattgcaaaacgtggtggtgtgattgagtttgttgatgcatca
cgtgtggtcattcgtgttcatgaaaatgaaatgatcgcgggtgaagcaggtgttgatatt
tataacctgatcaaatacacccgttctaaccaaaatacttgtattaaccagaaagttctt
gtgaatctgggcgataaagttggtcgtggtgatgtattggctgatggtccttctaccgat
ggtggtgagttggcattgggtcaaaacatgcgcgtcgcgttcatgacgtggaatggttat
aactacgaagactcaatcttgttatctgagcgagttttgcaggaagatcgtttaacttca
attcacattcaggaattatcatgtgttgcacgtgatactaaattgggtgcagaagaaatt
actgccgatattccgaatgtaggtgaagctgctctatccaagctagatgaatctggtatt
gtgtatatcggtgcggaagtgaccgcgggtgatattctggtaggtaaagtaacgcctaaa
ggtgaaactcaacttacgccagaagaaaaattgcttcgcgcgatcttcggtgaaaaagcg
gctgacgtgaaagattcatctttacgtgttccgtctggtacgaaaggtactgtgatcgat
gtacaagtcttcacacgtgatggtcttgagaaagatgatcgtgcacttgcgattgaaaaa
gcgcaattggattcgtaccgtaaagatttgaaagaagaatacaaaatctttgaagaagca
gcacgtgaacgtattgtgcgcttattaaaaggtcaggattctaatggtggtggcacgact
aaacgtggtgacaaactgactgaagatttattgtctggtcttgagctggtcgatttactt
gaaattcaaccaagtgatgaaggcatcgctgagcgtttaagtcaaattcaagtattcttg
aaagagaagagtgctgaaattgatgagaaatttgctgagaaaaaacgcaaattagcgacg
ggtgatgagttaacgacgggtgtcttgaaagtcgttaaagtctaccttgcagttaaacgt
cgtatccagccaggtgataaaatggcgggtcgtcacgggaacaaaggtgttgtttctaac
atcttgcctgtagaagacatgccacatgatgccaatggtgtacctgttgatatcgtgttg
aacccgttaggtgtaccgtcacgtatgaacgtgggtcagattctggagacacatctggga
ttggcagccaaaggtctgggtgagcaaatcgataagatgttgcaacaacagcgtaccatt
gccgaacttcgtatcttccttgataagatttataacaaggtcggtggtgagcaagaagat
ctaaacagtctgactgatgatgaagtcttggtattggctggcaacttgcgtaaaggtgta
ccactagcaactcctgtatttgatggtgctgaagaaagtcaaattaaagagttacttgag
ttggctgaattgccacgtactggtcaacagattttgtttgatggacgtacaggtgaacag
tttgaccgtcctgtaaccgtaggttatatgtacatgttgaaactgaaccacttggtggat
gacaagatgcatgcgcgttcaacaggttcatattctctggtaacgcaacaaccattgggt
ggtaaagctcaatttggtggtcagcgtttcggtgagatggaagtctgggcacttgaagct
tatggcgcagcatatacccttcaggaaatgctcactgtgaagtcggatgacgttgaaggt
cgtacacgcatctataagaacattgtagatggtaaccattatatggatccgggtatgcct
gaatcattcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaa
aatggtgactaa
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integrated database retrieval system
