Aurantimicrobium photophilum: AURMO_00344
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Entry
AURMO_00344 CDS
T05480
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aum
Aurantimicrobium photophilum
Pathway
aum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AURMO_00344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aum03400
]
AURMO_00344
Enzymes [BR:
aum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AURMO_00344
DNA repair and recombination proteins [BR:
aum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AURMO_00344
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
DUF2330
Motif
Other DBs
NCBI-ProteinID:
AWR20961
UniProt:
A0A2Z3RWN7
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All DBs
Position
complement(317529..318368)
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AA seq
279 aa
AA seq
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MSVRIATVNVNGVRAAFRKGMGDWLNTRGIDILALQEVRASTEDLEELLGPDWNILHDAA
TAKGRAGVALASRSTAEIHRVSLGADDFDTAGRWLEADYKIGDKILTVVSTYVHSGEVDT
PKQVEKFKFLEAMQERLPELAKHTDYALVVGDLNVGHTELDIKNWKGNVKRAGFLPQERA
YFDRFMGPAGENVTGPDGSTGTGLGWVDVGREAAGQVPGPYTWWSWRGQAFDTDAGWRID
YHLATPALAALASNYTVDRAESYDTRWSDHTPVVVDYNL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtccgcattgccaccgtcaacgtcaacggtgttcgcgccgccttccgcaaagga
atgggtgactggctgaacactcgtggcatcgacattcttgccctgcaagaggtgcgtgca
tcgaccgaagacctcgaagaactcctcggtcctgactggaacatcctgcacgatgctgcc
accgccaagggccgtgctggtgttgcactagctagccgcagcacggctgagattcaccgc
gtgagtctcggtgctgacgactttgacaccgcaggacgctggctcgaagccgactacaag
atcggcgacaagatcctgaccgtcgtgagcacctacgttcactccggtgaagtggatact
cccaagcaggtggagaagttcaagttccttgaagccatgcaggagcgtttgcctgaactg
gccaagcacaccgactacgcacttgttgtgggtgacctcaacgttggccacaccgagctg
gacatcaaaaactggaagggcaacgttaagcgtgctggcttcctgccccaggagcgcgcc
tactttgaccgcttcatgggtccagcaggagaaaacgtaactggacctgacggttccacc
ggcactggcctgggctgggttgatgtgggccgcgaagcagccggccaagttcctggcccc
tacacctggtggtcgtggcgtggtcaggcattcgataccgatgctggttggcgcattgat
taccacctcgccacccctgccctcgctgcccttgcttccaactacaccgtcgaccgcgct
gagtcctatgacactcgctggtcagaccacacccccgtcgtcgtcgactacaacctctag
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