Agrobacterium vitis VAR03-1: RvVAR031_pl03330
Help
Entry
RvVAR031_pl03330 CDS
T08810
Name
(GenBank) NADH oxidase
KO
K05784
benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00362
Benzoate degradation
avf00364
Fluorobenzoate degradation
avf00622
Xylene degradation
avf01100
Metabolic pathways
avf01120
Microbial metabolism in diverse environments
avf01220
Degradation of aromatic compounds
Module
avf_M00551
Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RvVAR031_pl03330
00364 Fluorobenzoate degradation
RvVAR031_pl03330
00622 Xylene degradation
RvVAR031_pl03330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD_binding_1
Fer2
FAD_binding_6
NAD_binding_6
HUN
Motif
Other DBs
NCBI-ProteinID:
BCH57002
LinkDB
All DBs
Position
pRvVAR031a:373557..374579
Genome browser
AA seq
340 aa
AA seq
DB search
MTDYKIALNFEDGVTRFIDCKDSEKVLDAAYRNKINLPMDCSDGVCGTCKCRAESGTYDL
GDDFIDDALTADEAERGLVLTCQMKPTSDCVIAVPTTSTSCKTGQQTFSATVAGITPHHD
AAIVLELDVDTAPAFLPGQYVNIAVPGSSQSRSYSFSSLPGEQRISFLIKKIPGGLMSNW
LERAQAGTRLDMTGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLDVLAKENSNQAIHLIY
GVTRELDLVLVDALEAYTKRLANFTYATVVAEEASSHPRKGWVTQHIPPEVLNGGDVDVY
LCGPPPMVDAVRSYFDEKGVKPNSFYYEKFTPNAAAKVAA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactacaaaattgcattgaatttcgaagacggcgtgacccgcttcattgattgc
aaagacagcgagaaggttctcgatgccgcttatcgcaacaagatcaacctgccgatggac
tgttctgacggcgtgtgcggcacctgtaagtgccgcgctgaaagcggcacttacgacctt
ggcgatgacttcattgacgatgcgctgaccgccgatgaggccgagcgcggtctggttcta
acctgccagatgaagccgacttcggattgcgtgattgcggtgccaactacctcgacatcg
tgcaaaaccgggcagcagacattttccgccacggtcgcgggcattacaccccatcatgat
gcagccattgtgctggagctggacgtggacacggcccctgccttcctgccgggtcaatat
gtcaatattgccgtgccgggatcttctcaaagccgatcctattctttcagctccctgccg
ggcgaacagcggatcagctttctgatcaagaaaattcccggcgggctgatgagcaattgg
ctggagcgggcgcaagctggcacccggctggacatgacgggaccgcttggcagcttttac
ctgcgcgacgtgcaaaggccgctgctgtttctggccggcggcactggacttgcccccttc
ctctccatgcttgacgttctggcaaaagagaattcaaatcaggccatccacctgatttac
ggtgttacccgagagcttgatctggtgctggtggacgcgcttgaggcgtatacaaagcgg
ttggccaattttacctatgcgaccgtggtggcggaggaagcgtccagccatccccgcaaa
ggctgggtcactcagcatataccgccagaggttttgaacggaggcgatgttgacgtctat
ctgtgcggtcctccgccgatggtggatgccgtgcgcagctatttcgatgagaagggcgtg
aagcctaacagcttctattatgaaaagttcacgcccaatgccgccgcgaaggtggcggca
tga
DBGET
integrated database retrieval system