Agrobacterium vitis VAR03-1: RvVAR031_pl06180
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Entry
RvVAR031_pl06180 CDS
T08810
Name
(GenBank) transposase
KO
K07484
transposase
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RvVAR031_pl06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_IS66
LZ_Tnp_IS66
DDE_Tnp_IS66_C
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
BCH57287
LinkDB
All DBs
Position
pRvVAR031b:67828..69405
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AA seq
525 aa
AA seq
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MLDAADLPDDVAALKAMLIAAQAREAAKDVAIASKDEHIACKEERIERLEKLVAAFKQAA
FGRKSEKTDPDQFDLALEDLETAMAAIHAEDEADVSAGNRIAKPRATNRGSLPKHLPRVQ
EVIEPESLICACGGCLHCIGEDVSERLDVVPAQFRVMVTRRLKYACRACTDGVVQAPAPA
RLIPAGLPTEATVAHVLVSKYADHLPLYRQAQIMSRQGIDLDRSTLADWVGRAAYELRPV
FDALIADLKRSAKLFMDETRAPVLDPGSRKTKTGYFWALARDDRPWSGGAPPGVAFTYAP
GRGGIHAERILQGFSGILQVDGYARYNRLIALDRAGPDIRLAYCWAHARRKLVEITRNGS
APIAEDGVKRIGELYRIEGELRGLDPEARLAGRQERSAPLVADMQAWLVHHRARVATKSP
LGDALAYIAKYWDGLKLFLTDGRIEIDNNSVERTIRPIALNRKNALFAGHDAGAENWATI
ASLIETCKLNTVDPQVYLTRTLSAIVRGHKQRQIDDLLPWNHLAA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatgccgccgaccttcccgatgatgttgccgccctgaaggcgatgctgatcgcg
gcgcaagcacgcgaggcggccaaggatgtcgcgatagcgagcaaggacgaacatatcgcc
tgcaaggaagagcggatcgaacggcttgagaagctggtcgcagcattcaagcaggcagcc
ttcggacgcaagtccgagaagaccgatcctgaccaattcgacctagcgctggaagacctg
gaaacggccatggccgcgattcatgccgaggatgaggcggacgtttctgctggaaaccgg
attgccaagccacgcgcgaccaatcgcggttcccttccaaagcatcttccccgtgtccaa
gaggtcattgagccggaaagtctcatctgcgcctgcggtggatgcctgcattgcattggc
gaggatgtctccgaacggctggatgtggtcccagcgcagttccgcgtcatggtcactcgc
cgcctcaaatatgcgtgccgtgcctgcaccgacggcgtagtccaggccccagctcccgct
cggttgatcccggcaggactgccgacggaagcgaccgtcgcccatgttttggtttccaaa
tatgccgatcatcttccgctctatcggcaggcccagatcatgagccgccagggcatcgat
ctcgaccgctccacgctcgccgactgggttggtcgggcagcctacgaactgcggcccgtc
tttgatgcactgatcgccgacctgaagcgctcggccaagctgttcatggacgagacccgt
gctccggttctcgatcccggatcgcgtaaaaccaagaccggatacttctgggcactggcg
cgggatgaccgaccgtggagcggcggtgctccgccgggcgtggccttcacctatgcgccc
ggtcggggaggcattcatgccgaacggatattgcagggcttctccggcatcctgcaggtc
gatggctatgccagatacaacaggctgatcgcgctagaccgcgctgggcccgacattcgg
cttgcctattgttgggcccatgcacgtcgcaagctggtggagatcacccgcaacggctca
gcaccgattgccgaggacggcgtcaaacggatcggcgaactttatcggatcgagggcgaa
ctgcgtggcctcgacccagaggctcgacttgccggacgacaggaacggtctgcgccgctc
gtcgccgacatgcaggcctggctcgtccatcaccgtgcccgtgtcgcgacgaagtccccg
ctcggcgacgccttggcctacatcgccaaatactgggatggcctgaagctcttcctgacc
gatggccgcatcgagatcgacaacaatagcgtcgagcggaccatccggccgatagcactc
aatcggaagaacgcactctttgccgggcacgatgccggggccgagaactgggcgacaatc
gcctcgctgatcgaaacctgcaaactcaataccgtcgacccacaagtctacctgacccgc
acgctctcagccatcgtcagagggcacaagcagagacagatcgatgatctgcttccctgg
aatcatctggccgcgtaa
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