Allorhizobium ampelinum: Avi_0474
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Entry
Avi_0474 CDS
T00851
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi00300
Lysine biosynthesis
avi01100
Metabolic pathways
avi01120
Microbial metabolism in diverse environments
avi01230
Biosynthesis of amino acids
Module
avi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Avi_0474 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avi01002
]
Avi_0474 (dapE)
Enzymes [BR:
avi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Avi_0474 (dapE)
Peptidases and inhibitors [BR:
avi01002
]
Metallo peptidases
Family M20
Avi_0474 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ACM35331
UniProt:
B9JZL9
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All DBs
Position
1:402014..403228
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AA seq
404 aa
AA seq
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MSKHPANSSATDPVDNLQTLIRCPSVTPAEGGALSALAAMLEPLGFTVERMVAREEGTPD
VENLYARLGTEGPHLMFAGHTDVVPVGNEADWTYPPFSAEIAGGELYGRGAVDMKGGIAC
FVAAIARHIESQGAPKGSISFLITGDEEGPSINGTTKLLEWAAAKGERWDACLVGEPTNP
DQLGDMIKIGRRGSLSGEIIVKGVQGHAAYPHLADNPVRGMIKLAEALMHPAFDAGTENF
QPSNLEVTTIDVGNAATNVIPARASAKFNIRFNDTWTAETLRTEIIARLDTASADPLLRP
GRPPIAYELVWADRPSQVFLTRNNALISSLSAAIEKMTGKTPALSTTGGTSDARFIKDYC
PVVEFGLVGQTMHMVDERVAVSDLEALTGIYGAFISSWFTHAGA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcatccagccaattcatctgccaccgatcccgtcgacaatcttcagaccctg
atccgctgcccctccgtgacgcctgccgagggcggggcgctgtcggcgctggccgccatg
ctggaaccgttgggctttaccgtggaacggatggtggcgcgcgaagagggcacgccggat
gtcgagaacctctatgcccggctgggcacggaggggccgcatctgatgtttgccgggcat
acagatgtggtgcctgtaggcaatgaggcggactggacctatccgccgttttccgccgag
atcgctggaggcgaactttacggacgtggcgcggtcgatatgaagggcggcatcgcctgc
tttgtcgccgccattgcccgccatatcgaaagccaaggcgcgccgaaggggtctatttcc
ttcctgataaccggtgatgaggaaggcccctcgatcaacggcaccaccaaactgctagaa
tgggccgccgccaaaggcgagcgctgggatgcctgcctggtgggcgaaccgaccaatccc
gaccagcttggcgacatgatcaagatcgggcggcgcggctcgctgtcaggcgagatcatc
gtaaagggcgtccagggccatgccgcctatccgcatctggccgacaatccggtgcggggc
atgatcaagcttgcggaagcgctgatgcatccggccttcgatgcgggaacggaaaatttt
cagccttccaatctggaagtcacgacgattgatgtcggtaacgccgccaccaatgtcatt
ccggcccgtgccagcgccaaattcaatatccgctttaacgatacctggaccgccgagacg
ctgcggaccgaaatcattgcccggctcgatacggccagcgccgatccgctgctgcgacca
ggccgcccgccgattgcctatgagctggtctgggccgaccggccaagccaggtgttcctg
acccgcaacaacgcgctgatctcctccttgagtgctgccatcgaaaaaatgaccggtaaa
acgccagccctgtcgacaacagggggtacgtccgacgcccgcttcatcaaggattactgc
ccggtggtggaattcggccttgtcggccagaccatgcatatggtcgatgagcgggttgcc
gtctccgatctggaggcgttgaccggcatatatggcgccttcatcagcagctggtttact
catgccggggcttaa
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