Apaloderma vittatum (bar-tailed trogon): 104278130
Help
Entry
104278130 CDS
T08559
Symbol
APTX
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104278130 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avit03400
]
104278130 (APTX)
Enzymes [BR:
avit01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
104278130 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
104278130 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
104278130 (APTX)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104278130 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
104278130 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
104278130
NCBI-ProteinID:
XP_009873318
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MRVCWLVGKEKCSQRVKLPHLEAVVLGRGPETGITDKKCSRQQVQLKADCNKGYVTVKQI
GVNPTSVDLVIIGKDEEVKMKPGQVLHIVNKLYPYTVQFDEESGKTVTEVEEKIKTGKTP
REDSCENDDVELMPRKTMKMDVVDTQGSSANPKLSNTSVPPREGTSGKKEHLGHWSQGLK
SSMQDPKMQVYKDEKTVVIKDKYPKARYHWLILPWDPISSLKSVTRDHLELLEHMDAVGQ
KMIAQCPARESLEFRLGYHAVPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDYFLNSED
VIEMVRNKGRVMVKDHVSELLKLPLRCHRCKQQLSTIPQLKEHLKKHWPK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgtgctggctcgtggggaaggaaaaatgcagtcagcgagtgaaactaccacac
ttggaagcagtggtacttgggcgtggcccagagactgggataacggataagaagtgttca
cggcagcaagtgcagttaaaggcagactgtaacaagggatatgtcaccgttaagcagata
ggagtcaacccaactagtgttgatctcgtgattattggcaaggatgaagaggtgaaaatg
aagccaggccaagttctacatattgtgaataaactctacccctacacggtgcaatttgat
gaagagtcagggaaaactgttacagaagtggaagagaaaataaaaaccggcaagacgcca
cgcgaggactcctgtgagaatgatgacgtagagctcatgcccagaaaaacaatgaagatg
gatgtggtggatacacaaggcagttctgcaaaccccaagctaagcaataccagcgtacct
ccacgtgaagggacgtcgggtaaaaaggagcatttaggacactggagtcagggtctaaag
agctccatgcaagatccaaaaatgcaggtttacaaagatgaaaagactgtagtcatcaag
gataaatatcccaaagcacgttaccactggcttatcttaccatgggaccccatttcaagc
ctgaagtcagtcaccagggaccatctcgaacttttggaacacatggatgcagttgggcaa
aaaatgatcgcacagtgccctgccagagagagtctggagttcagactgggttaccacgct
gtccccagtatgagtcagctacatttgcatgtaatcagccaggattttgactctccggcc
ctgaaaaccaaaaagcactggaactcttttactacagactacttcttaaactctgaagat
gtgatagagatggtaagaaacaagggaagagtgatggtgaaagatcatgtctctgagctt
ctgaaattgccccttagatgccatcgttgcaaacaacagctgtccactatcccacagtta
aaggaacatctcaagaaacactggccaaaatga
DBGET
integrated database retrieval system