Apaloderma vittatum (bar-tailed trogon): 104279464
Help
Entry
104279464 CDS
T08559
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04145
Phagosome
avit04814
Motor proteins
avit05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104279464
09142 Cell motility
04814 Motor proteins
104279464
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104279464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104279464
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
avit04812
]
104279464
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
104279464
Cytoskeleton proteins [BR:
avit04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
104279464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
WDR55
WD40
Beta-prop_EML
Dynein_IC2
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Beta-prop_IP5PC_F
Beta-prop_SPT8
WD40_RFWD3
Nbas_N
Motif
Other DBs
NCBI-GeneID:
104279464
NCBI-ProteinID:
XP_009875058
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
VQPLRVVTADTCLFHYLVPPPTSPSSKSVSTPSEAGSQDSGDGAVGSRRGPVKLGMAKIT
QVDFPPREIVTYTKETQTPVMTQPKEDEEDEDDVVAPKPLVEPEEEKTLKKEEEEEAAPH
ELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS
LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPE
YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
VNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVHKQSKAVAVTCMSFPIGDVNN
FVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGINCHAAVGPVDFSHLFVTSSFDWTV
KLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIT
VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRSDEWTRFGRTLAEINANRA
DAEEEAATRIPA
NT seq
1661 nt
NT seq
+upstream
nt +downstream
nt
ctgtgcaacctctgcgagtagtaacagcggatacctgtctgtttcactatttagtccctc
ctcctacctctccatcttccaaatccgtgagtacgccaagtgaggctggaagccaggact
ctggggatggcgctgttgggtctagacgtggacctgttaaacttggaatggccaaaatta
cccaggttgactttcctcctcgagaaattgttacatatacaaaggagacgcagacacctg
ttatgactcagccaaaggaagacgaggaagacgaagatgatgtggttgcaccgaaaccat
tagtagaacctgaagaagaaaaaacattaaaaaaagaggaggaagaagaagctgctcctc
atgaacttaccgaagaggaaaaacaacaaattctgcattctgaagaatttttaagtttct
ttgaccactccacaagaattgtcgaaagagccctttctgaacaaatcaacattttctttg
actacagtggaagagacttagaagacaaagaaggagagattcaagcaggagcaaaactgt
ccttaaataggcagttttttgatgaacgttggtcaaagcatcgtgttgtcagttgtttgg
actggtcatctcagtacccagaattacttgtagcttcttacaacaacaatgaggatgcgc
ctcatgagcctgatggggtggcccttgtatggaatatgaaatacaagaaaactactccag
agtacgtctttcactgccagtcagcagtgatgtcagctacatttgcaaaatttcatccca
atctggtggttggtggcacgtactcaggccagatagtgctgtgggataatcgcagcaata
agcgaaccccagtgcagagaacgccgctttcagctgctgctcacacgcacccagtgtact
gtgtaaatgttgttgggacccagaatgctcataatttgattagtatctcaactgatggga
aaatatgctcttggagtctggacatgctttcccaaccgcaggatagcatggagctggttc
acaaacagtccaaggctgtggctgttacctgcatgtccttccctattggagacgtcaaca
actttgttgtgggcagtgaagaaggctcagtgtacaccgcatgccgtcatggcagcaaag
ctggaatcagtgagatgtttgaaggacaccagggaccaattacaggtatcaactgccatg
cagcagttggacctgtggacttctcacatctttttgtcacctcttcttttgactggacag
taaagctttggacaactaagaataacaaacctctctactcctttgaagacaactcagatt
atgtatatgatgtgatgtggtctccaactcaccctgccttgtttgcctgtgtggatggga
tgggcagacttgacctgtggaatctcaacaatgacactgaggtgccaactgcaagcatca
cggtggagggcaatcctgctctgaaccgggtgagatggacgcattctgggagagagattg
ctgtaggtgattcggaggggcaaatagttatatacgatgtgggagagcaaattgccgttc
ctcgcagcgatgagtggactcgatttggtcgaacactggcagaaataaatgctaacagag
ctgacgcagaagaggaagctgcaacccgcataccggcatag
DBGET
integrated database retrieval system
