Azotobacter vinelandii CA: AvCA_39570
Help
Entry
AvCA_39570 CDS
T02633
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
avl
Azotobacter vinelandii CA
Pathway
avl02024
Quorum sensing
avl03060
Protein export
avl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AvCA_39570 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AvCA_39570 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AvCA_39570 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
avl02044
]
AvCA_39570 (ffh)
Enzymes [BR:
avl01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
AvCA_39570 (ffh)
Secretion system [BR:
avl02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AvCA_39570 (ffh)
Eukaryotic Sec-SRP protein
AvCA_39570 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
AAA_16
YqeC
cobW
AAA_33
AAA_30
AAA_31
APS_kinase
ABC_tran
ATP_bind_1
AAA_19
TsaE
ParA
Helicase_RecD
ArsA_ATPase
AAA_24
AAA_14
6PF2K
LicP_NPro
Thymidylate_kin
KTI12
Motif
Other DBs
NCBI-ProteinID:
AGK13456
LinkDB
All DBs
Position
complement(4004675..4006051)
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKEFVNRIKERAV
GTEVSKSLTPGQAFVKIVRVELETLMGAANEDLALNAAPPAVVLMAGLQGAGKTTTVGKL
ARFLKERRKKSVLVVSADIYRPAAIKQLETLAEEVGVTFFPSDAAQKPVDIAQAAIREAR
LKFIDVVLLDTAGRLHVDADMMEEIKLLHAAAKPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVVLTKVDGDARGGAALSVRYITGKPIKFIGMGEKSDALEPFHPDRMASRILGMGDV
LSLIEEAEHKLDRQKAEKLTSKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPAIGGV
NLAQMGNAQGVAEKQLMQMEAIINSMTPAERRDPDIISGSRKRRIALGSGTQVQDVGRLI
KQHKQMQKMMKKFTAKGGITKMMRGMGGMFPGGRLPKI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaccttaccgatcgcctttcccagacccttcgtcatgtcaccggcaaggcc
aagctgaccgaggacaacatcaaggataccctgcgcgaagtgcgcatggccctgctcgag
gccgatgtcgcgctgccggtggtcaaggagttcgtcaatcggatcaaggagcgcgctgtc
ggcaccgaggtttcgaagagcctgacgccggggcaggccttcgtgaagatcgtccgcgtc
gagctggaaacgctgatgggggcggccaacgaggatctggcgctgaatgcggcgccgccg
gcggtggtattgatggctggcctgcagggggcgggcaagaccaccaccgtgggcaagctc
gcgcgctttctcaaggagcgccgcaagaagtcggtcctggtggtgtccgccgacatctac
cgcccggcggcgatcaagcagttggaaaccctggccgaagaggtcggcgtcaccttcttc
ccatccgatgccgctcagaagcccgtggatatagcccaggcggcgattcgcgaggcgcgg
ctcaaattcatcgacgtggtgctgctggataccgccggccgtctgcacgtcgatgccgac
atgatggaggagatcaagctcctgcatgccgccgccaagccggtcgagaccctgttcgtg
gtcgatgcgatgacgggccaggacgccgccaacacggccaaggccttcggcgacgccctg
ccgctgaccggcgtggtgctgaccaaggtggatggcgacgcgcgtggcggtgccgccttg
tcggtccgctacatcaccggcaagccgatcaagttcatcggcatgggcgagaagagcgat
gccctggagcccttccacccggatcgcatggcttcgcgcatcctcggcatgggcgatgtg
ctcagcctgatcgaggaggccgagcacaagctcgaccgccagaaggcggagaagctcacc
agcaagctgaagaagggcaagggcttcgaccttgaggatttccgcgatcagttgcagcag
atgaagaacatgggggggctcggcgggctgatggacaagctgccggccatcggtggcgtc
aacctggcgcagatgggcaatgcccagggcgtggcggaaaagcagctgatgcagatggag
gcgatcatcaactccatgaccccggccgagcgccgcgatccggacatcatcagcggttcg
cgcaagcggcgcatcgccctcggttccggcacccaggtgcaggatgtcggccgtttgatc
aagcagcacaagcagatgcagaagatgatgaagaagttcaccgccaaggggggcatcacc
aagatgatgcgtggcatgggcggcatgttccccggcggtcggctgcccaagatctag
DBGET
integrated database retrieval system
