Azotobacter vinelandii DJ: Avin_05890
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Entry
Avin_05890 CDS
T00885
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
avn
Azotobacter vinelandii DJ
Pathway
avn03030
DNA replication
avn03430
Mismatch repair
avn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Avin_05890
03430 Mismatch repair
Avin_05890
03440 Homologous recombination
Avin_05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avn03032
]
Avin_05890
03400 DNA repair and recombination proteins [BR:
avn03400
]
Avin_05890
Enzymes [BR:
avn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Avin_05890
DNA replication proteins [BR:
avn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Avin_05890
DNA repair and recombination proteins [BR:
avn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Avin_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACO76842
UniProt:
C1DKH9
LinkDB
All DBs
Position
complement(568388..569110)
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AA seq
240 aa
AA seq
DB search
MNPFAFLSSLGIDRPPLDDDQRRRLRRLPTAPHLDSRPLHAQRFVVLDLETTGLNVERDV
VLSIGAVLIENDAIDLSRQFECTLRRRLKSVTESVLIHGIAPSALAVGTAPAEALLRFME
YAGDCVFLAFHAPFDQRMLGRALKDELGYRLRHPFLDVADLAPMLFPEALVHPGGLDQWI
QYFGLDMSRRHHAAADALATAEIALILFNRARRTGLDNMAELGERAARWQRARRAVQHSL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgttcgccttcctgtcttccctgggcatcgacaggccgccgctcgacgacgac
cagcggcgccgcctgcgccgcctgccgacggcgccgcacctggacagccgcccgctgcac
gcccagcgtttcgtggtgctcgacctggagaccaccggcctcaacgtcgagcgcgacgtc
gtcctgtcgatcggcgccgtgctcatcgagaacgacgccatcgacctctcccggcagttc
gagtgcaccctgcggcggcgcctgaaaagcgtgaccgaaagcgtgctgatccacggtatc
gcgcccagcgccctggccgtcggcaccgcgccggccgaagccttgctgcgcttcatggaa
tatgccggcgactgcgtgttcctcgccttccacgcccccttcgaccagcgcatgctgggc
cgcgcgctgaaggacgagctgggctacaggctgcgccaccccttcctcgacgtcgccgat
ctcgcacccatgctgttccccgaggccctcgtccatccgggcggcctggaccagtggata
cagtatttcggcctggacatgtcccggcgccaccacgctgcggccgacgccctggccacc
gccgaaatcgccctgatcctgttcaaccgcgcccggcgcacgggcctcgacaacatggcc
gaactgggcgagcgggccgcccgctggcagcgggcgcgccgcgcagtccagcactcgctt
tga
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