Agrobacterium vaccinii: HRR99_02325
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Entry
HRR99_02325 CDS
T08171
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
avq
Agrobacterium vaccinii
Pathway
avq00540
Lipopolysaccharide biosynthesis
avq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HRR99_02325 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
avq01005
]
HRR99_02325 (waaA)
Enzymes [BR:
avq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HRR99_02325 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HRR99_02325 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
HRR99_02325 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
HRR99_02325 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
avq01005
]
Lipid A
HRR99_02325 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
UHS60441
LinkDB
All DBs
Position
circular:486222..487538
Genome browser
AA seq
438 aa
AA seq
DB search
MNSRIARFALSGYRIAGVAAYPFARPYLMYRAAKGKEDKRRRMERFGHASADRPRGPLVW
FHAASVGETLALVPLIREIRKRDIHVLLTTGTVTSAELSKTRLGDDVIHQYVPLDIKISI
NRFLTYWMPDAAITAESEIWPVTMMELERRHIPQIRVNARLSDRSFGRWHNRSDFAEALF
SKLALVVAQSDLDAERFRDLGSWPVVVSGNLKGDTDPPPCDATVLDTYRRQIGNRKTWAA
ISTFEGEEKAAATVHNAIKSRDGQLTIIVPRHPERCDDIETMLKGMNLNVARRSRNDVIT
PQTDVFLGDSIGEMGLYLRLTELAFVGRSLLAEGGQNPLEPAMLGCAVLSGAHVQNFREA
YQKLLRSGGGRIIRDVEMLAKAVHYLLVNDNERYKMIDAGGRVIQDMRGALSCTVKALEP
YINPLTVTAKLQPRSAVG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccgaatcgcacgtttcgccctttcgggttatagaattgcaggcgttgcagcc
tatcccttcgccaggccttacctcatgtaccgcgctgccaagggcaaggaagacaagcgt
cgccgcatggaacgcttcggtcatgccagtgccgaccgtccgcgcggaccccttgtctgg
ttccacgcagccagtgtcggtgaaacgctggcgctcgtgccgctcattcgcgagatacgc
aagcgcgatattcacgttcttttgaccacgggcacagtgacgtctgcggagttgagcaag
acccgcctcggcgacgatgtcatccaccaatatgtgccgctcgatatcaagatttccatc
aaccgcttcctcacctactggatgccggacgcggccattaccgctgaatccgagatatgg
ccggtgacgatgatggagctcgaacgccgccacattccgcaaatccgcgtcaatgcgcgc
ctttcggatcgctcctttggacgttggcacaaccggtccgattttgccgaggccttgttc
agcaagcttgctctcgttgtcgcccagtccgatctcgatgccgaacgtttccgtgatctc
ggttcgtggcctgtcgtcgtatcgggcaatctcaagggcgacaccgatcctccgccctgc
gatgcgactgtgctggacacctatcgtcgccagatcggcaaccgcaagacatgggcagcc
atctccaccttcgaaggggaagagaaggcggcggccacggttcacaacgccatcaaatcc
cgcgatgggcagttgacgatcatcgtgccgcgtcacccggaacgctgcgacgacatcgag
accatgctgaaaggcatgaacctcaacgtcgcacgccgcagccgcaacgatgtgatcacg
ccgcagacggatgtgtttctgggcgacagcatcggtgaaatggggctttatctgcgcctg
accgaactggcctttgtcggccgctccctgctggcagagggtgggcagaacccgctggaa
ccagccatgctgggctgcgcggtactgtcaggtgcgcatgtgcaaaacttccgcgaagcc
tatcagaaattgctgcggtccggcggcgggcgcatcatccgcgatgtagaaatgctggcg
aaggcggtgcattacctgctggtcaacgacaatgaacgctacaagatgatcgatgctggc
ggcagggtcattcaggacatgcgcggcgcgctgtcctgcactgtgaaggcgcttgaaccc
tacattaacccattgacggtaacggcgaaactccagccccgcagtgcggtcggctga
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