KEGG   Agrobacterium vaccinii: HRR99_16955
Entry
HRR99_16955       CDS       T08171                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K07799  membrane fusion protein, multidrug efflux system
Organism
avq  Agrobacterium vaccinii
Pathway
avq02020  Two-component system
Brite
KEGG Orthology (KO) [BR:avq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HRR99_16955
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:avq02000]
    HRR99_16955
Transporters [BR:avq02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   HRR99_16955
SSDB
Motif
Pfam: BSH_RND RND-MFP_C Beta-barrel_RND YknX_C BSH_CusB HH_MFP_RND Biotin_lipoyl Beta-barrel_RND_2 BSH_CzcB HH_EMRA BSH_LcnD PDZ PDZ_Tricorn CzcB_C BSH_YknX PTS_EIIA_1 OEP PDZ_6 HH_CzcB TPR_25
Other DBs
NCBI-ProteinID: UHS64245
LinkDB
Position
linear:complement(415043..416281)
AA seq 412 aa
MTFVVVAAISALLFVYRSDLQPYLPAWASQTAAPQESAHASGGSQSKNGDRRGGGGQAGG
RTITVTVAVAKSGSLPVTRQTIGTIVPVASTALTSPISGIVANVLAKDGAEVKAGDLLVQ
IDDRTIKANIQRDQAQLAKDQATLDSANATLSRVETLAKTGVDTQQQVSDASATAKQAAA
TLLVDQANIAADNVTLSQTQIRAPFDGKLGAVLFSAGAYVAPGANVAQLTQMRPVYAEFV
LPEPDLDLIRSTMANNSLTADVTPTQAGADNSPATGKIVFIDNNVDAASGTFKLRMLLEN
HAERFWPGQSLKVSVNAGQADNLVIVPMVALQPHSDGYSSFVVKPDNTVEQRKVTVALSN
GNLAGVSDGLKEGDALVTEGQASLTNGSHVMVKNPSEGADAGAKISQNGAAL
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgacctttgtggtagtcgcagcgatttctgctctgctttttgtctaccgcagcgatctc
caaccctatttgccagcctgggcgagccaaactgcggctccgcaggaaagcgcgcacgca
tccggcggcagccagtctaaaaacggcgacaggcgtggtggaggaggtcaggcaggcggg
cgcaccattaccgtgacggttgccgttgcgaaatccggctcgttgccggtcacgcgacag
accatcggcaccatcgtgcccgtggcgtctacagcgctgaccagccccatttccggcatc
gttgccaatgtgctggccaaggatggcgcggaggtcaaggcaggcgatctcttggtgcag
atcgatgacagaacgatcaaggccaatatccaacgcgatcaggcgcagcttgccaaggat
caagccacgctggattccgccaatgccactctgagcagggtcgagactttggccaaaacc
ggcgtagacacccagcagcaggtcagtgatgccagcgccaccgccaaacaggctgcagca
accctgctggtcgatcaggctaatatcgccgcagataatgtcaccctgtcgcaaacccag
atcagggcgccattcgatggcaagctgggcgctgtcttgttttcagcaggcgcctatgtc
gcaccgggcgcgaatgtagctcagttgacgcagatgcggcccgtctatgcggagttcgtg
ctgccggagccagacctcgaccttatccgctcgaccatggcaaacaacagcctgaccgca
gacgtcacgccgacgcaagcgggtgccgataatagtcccgccaccggcaagatcgtgttc
atagacaacaatgtcgacgcggcctcgggcacattcaaactgcgcatgctgctggaaaat
catgctgaaaggttctggcccggccagtcgctcaaggtctcggtcaatgccgggcaggca
gacaatctggttatcgtacccatggtggcccttcagccgcattccgacggctacagcagc
ttcgtggtcaagcctgataataccgtcgaacagcgcaaggtgaccgtggcgctcagcaac
ggcaatctcgccggtgtttcggacgggctgaaggaaggcgacgctctggtcaccgaaggt
caggccagcctgacgaacggcagccatgtgatggtgaaaaacccgagtgaaggcgcagat
gctggcgccaagatttcccaaaatggggctgcgctatga

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