Boudabousia tangfeifanii: BK816_05520
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Entry
BK816_05520 CDS
T04541
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
avu
Boudabousia tangfeifanii
Pathway
avu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BK816_05520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avu03400
]
BK816_05520
Enzymes [BR:
avu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BK816_05520
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BK816_05520
DNA repair and recombination proteins [BR:
avu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BK816_05520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DZR
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
AOZ72819
UniProt:
A0A1D9MKV6
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All DBs
Position
complement(1335336..1336259)
Genome browser
AA seq
307 aa
AA seq
DB search
MPELPEVETVRRGFHELVAGRQFSQVEVYRDRLVRTQLGGPSEFRARLLGQNIEGVARRG
KFMWLALANGQAMVVHLGMSGQIRPLTKEQAAGPARRHERVRFWFQDATEELAGFSFIDQ
RTFGSLQVCDTVPTSDGFPAGWPLASTHLPLPAAKIARDLLDPYLDTAAVINNWKQRVAP
IKTLLLAQNVVSGFGNIYADEALFAAKVRGTTPAGALSHKKLQDILDQGARIMTDSLSRG
GTSFDALYVDVNGESGTFADYLQVYGRAKQPCRVCGQELKVIQLAKRSHHYCVSCQRSRS
LPRLEGK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcccgaggtcgaaacggttcgtcgcggttttcacgagctagttgccggc
agacagttttcccaagttgaggtttatcgtgatcgtttagtgcgcactcaactaggtggt
ccttcagaatttcgtgctcgtctcctcgggcaaaatatcgagggcgtagctcggcgtggc
aaattcatgtggttggccttagctaatgggcaggcaatggtggtccacctcggtatgtct
ggtcagattagaccacttactaaagaacaagcagctgggcctgcgcgacgtcacgaaaga
gttcgtttctggttccaagatgcaactgaggaattggcaggttttagcttcatcgatcag
cgcactttcggttccctacaggtgtgcgacactgttccaaccagtgacggctttcctgct
ggctggccgcttgcttcgactcacttgcctttacctgccgctaaaatcgcccgcgattta
cttgatccatatttagataccgcggctgtcatcaataactggaagcagcgagttgcgcca
attaaaactctattgttggcacagaacgtagtttcaggttttggcaatatctatgccgat
gaagcgctctttgctgccaaagttcgcggcacaaccccggcgggggcgttgagccacaaa
aagcttcaggatatcttggaccagggtgctcgaatcatgactgattcgctttcccgtggt
gggaccagcttcgatgccttgtacgttgacgttaatggtgagagcggaacttttgccgat
taccttcaggtttatggtcgggcaaaacagccttgtcgagtttgtggccaggaactaaaa
gtaatccaattggctaaacggtcacaccattattgtgtctcttgtcaacgtagccgcagt
ttaccgcgtctagaaggaaagtga
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