Agrobacterium vitis VAT03-9: RvVAT039_41580
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Entry
RvVAT039_41580 CDS
T08809
Name
(GenBank) acetyl/propionyl-CoA carboxylase subuit alpha
KO
K11263
acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:
6.4.1.2
6.4.1.3
6.4.1.-
6.3.4.14
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00061
Fatty acid biosynthesis
avv00074
Mycolic acid biosynthesis
avv00280
Valine, leucine and isoleucine degradation
avv00620
Pyruvate metabolism
avv00630
Glyoxylate and dicarboxylate metabolism
avv00640
Propanoate metabolism
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01120
Microbial metabolism in diverse environments
avv01200
Carbon metabolism
avv01212
Fatty acid metabolism
Module
avv_M00082
Fatty acid biosynthesis, initiation
avv_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RvVAT039_41580
00630 Glyoxylate and dicarboxylate metabolism
RvVAT039_41580
00640 Propanoate metabolism
RvVAT039_41580
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RvVAT039_41580
00074 Mycolic acid biosynthesis
RvVAT039_41580
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RvVAT039_41580
Enzymes [BR:
avv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
RvVAT039_41580
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
RvVAT039_41580
6.4.1.3 propionyl-CoA carboxylase
RvVAT039_41580
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
BSH_RND
Dala_Dala_lig_C
BSH_YhbJ
BSH_CzcB
BSH_YknX
RnfC_N
BSH_CusB
ATP-synt_ab_Xtn
LAL_C2
DUF2118
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
BCH66942
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All DBs
Position
2:complement(870990..872726)
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AA seq
578 aa
AA seq
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MKKVLIANRGEIAVRIIRACRDYGLQSVAVYADPDIDALFVQLADEAYGLSGAKPSETYL
DIAKLIDIAKRSGADAVHPGYGFLSERAEFARAVIDAGLTWIGPDPQVIEALGDKVEARR
IATSVGAPLVAGSDGPVDTAEEVIAFAERHGLPVAIKAAHGGGGRGLKVAWKMDEIPELY
ASAVREATVAFGRGECFLERFLDRPRHIEAQVIADKHGTVLVLGTRDCSLQRRNQKLVEE
APAPFLTDAQRQSIHDAAKAICAAAGYSGAGTVEFLLGVDGTISFLEVNTRLQVEHPVTE
ETTGIDLVIEQFRIAEGLPLAITETPVPRGHSIEFRINAEDPGRGFLPTPGTITRFAAPS
GPGVRLDSGVDTGSTIPGVYDSLMAKLIVTGTTREQALQRARRALKEFQIEGVATVLPFH
RAATETADFIGTDGFKVHTRWIETDFAAMPEAAMRPEPAADTSLIRTHVEIDGKRHALGI
PAQLLAAFGSLSVNAGQAVTSDAGNTPEKGAVIAPVSGTVQSFKVKDGDQVAAGDLLAVM
EAMKMETQIMATSAGTVSLVASEGDYLAAGSLLLKIVA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtgctgatcgccaaccggggcgaaatcgccgttcgcatcatccgcgcctgt
cgcgattacgggctgcaatccgtcgcagtctatgccgatccggatatcgacgcgctattc
gtgcagcttgccgatgaggcctatgggctgtccggtgccaagccgtcagagacctatctc
gatatcgccaaactgattgatattgccaaacggtccggcgcggacgccgtccatcccggc
tacggctttctgtcggagcgcgccgaatttgcgcgtgcggtgatcgatgccggtctgacc
tggatcggccctgatccgcaagtcatcgaagcgctgggcgacaaggttgaggcgcggcgg
atcgccaccagcgtcggcgcgccactggtggcaggcagcgacgggccggtggacaccgcc
gaggaagtcattgcttttgccgaacgccacggcctgccggttgccatcaaggcggcccat
ggcggcggcggacgtggcttgaaagtcgcctggaaaatggacgaaatcccggagctttac
gcatcggctgtgcgcgaagcgaccgtggcttttggccggggcgaatgctttttggagcgc
ttcctcgaccggccccgccatatcgaggcgcaggtgattgccgataaacatggcaccgtg
ctggtgctcggcacccgcgattgctccttgcagcggcgaaaccagaaactggtggaagag
gccccggcccccttcctcacggatgcgcagcgccaatccatccatgatgccgccaaggcc
atctgcgcagcggcgggctatagcggtgcgggaacggtggaattcctgctgggggttgac
ggtacgatttcgttccttgaggtgaatacccggctacaggtcgagcatccggtgacggaa
gaaaccactggcatcgacctcgtcatcgaacagttccgcattgcagaaggcctgcccttg
gcgatcacggaaacacccgtaccacgcggtcattccattgagtttcgcatcaatgctgaa
gatccgggccggggctttctgccaacaccaggcacgatcacccggtttgcggccccgtcc
ggccccggcgtgcggctcgatagcggtgtggataccggctccaccattcccggcgtctat
gattcgctgatggcgaagctgatcgtcaccggcaccacccgcgagcaagccttacaaagg
gcaagacgcgccctgaaggaattccagatagaaggcgtggcaaccgtgctacccttccac
cgtgccgccacggaaaccgccgatttcatcggcactgatggtttcaaggtccatacccgc
tggatcgagaccgatttcgccgccatgcctgaagcagctatgcgaccagagccagccgcc
gacacgtcgctgatccgcacccatgttgaaatcgatggcaagcgccatgccctcggcatt
ccggcccagcttctcgcagcctttggcagtctctcagtcaatgccggacaggccgtaaca
agtgatgcgggaaatacgccggaaaaaggcgccgtcatcgccccggtgtccggtacggtt
cagtctttcaaggtgaaggatggagatcaggttgcggcaggtgatcttctggccgtcatg
gaggcgatgaagatggaaacgcagatcatggcgacatcagccggaaccgtcagtctcgtc
gcaagcgaaggcgattatctggctgcgggaagcctgctcttgaagattgtcgcttaa
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