Acinetobacter venetianus: HWI77_15510
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Entry
HWI77_15510 CDS
T08415
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
avz
Acinetobacter venetianus
Pathway
avz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
avz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HWI77_15510 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avz03021
]
HWI77_15510 (rpoB)
03400 DNA repair and recombination proteins [BR:
avz03400
]
HWI77_15510 (rpoB)
Enzymes [BR:
avz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HWI77_15510 (rpoB)
Transcription machinery [BR:
avz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HWI77_15510 (rpoB)
DNA repair and recombination proteins [BR:
avz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HWI77_15510 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
QNH51000
LinkDB
All DBs
Position
complement(3248791..3252879)
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPQVMDAPYLLSIQVDSYRTFLQDGKTPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVFVRIDRRRKLLATVILRALNYTNEQILNLFYEKVPVYLDMGSYQ
IDLVPDRLRGEMAQFDILDNDGKTIVEQGKRINARHVRQMEAANLAKLSVPDEYLYERIT
AEDITLKSGDVIPANTVLSHEIMVKIAEGGVKQFNILFTNDIDRGPFVADTLRADTTTGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RKVVDGRVTDDVEYLSAIEEVGTVIAQADSAVDKDGNLTEEMVSVRHQGEFVRMSPERVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD
SGVCVIADRGGAIEYVDASRIVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQNVIV
KLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDERAQAIEKA
QLDAYRKDLKEEYKIFEEAARERIVRLLKGQESNGGGSTKRGDKLSEDVLSGLELVDLLE
IQPNDEAIAERLTQIQVFLKEKSYEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGDKIEKMLKEQRTVLELRDFLDKIYNKVGGEQEELNSLTDAEILALSGNLRAGVP
LATPVFDGAEESQIKDLLELADISRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccccaa
gtaatggatgcaccgtacttgctttcgattcaagtcgattcgtatcgtacattcttgcaa
gacggtaaaactccaaaaaatcgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctattgaaagttattctggcaatgctgctttagaatttgttgagtatagtcttggt
aagcctgagtttgacgtacgtgaatgtattttacgtggttcaacttatgcagcaccaatg
cgcgtaaaaattcgtttgatcatcaaagatcgtgaaacgaaatcaattaaagacgttcgt
gaacaagaagtttacatgggtgaaatgccactcatgaccgataacggtacatttgttatc
aacggtacagagcgtgtaatcgtatctcaattacaccgttcaccaggcgtattctttgac
catgacaaaggtaaaacccactctagcggtaaagtgttgtattcagcacgtattattcct
taccgtggttcatggttagattttgaatttgatgctaaagatttagtattcgtacgtatt
gaccgtcgtcgtaaattgttggcgactgtgattttacgtgccttgaattatacaaatgaa
caaatcttgaatttgttctacgaaaaagtacctgtatatctagatatgggtagctatcaa
attgacctcgttcctgaccgtttacgtggtgaaatggcgcaatttgatatcttggataac
gatggtaaaacaatcgttgaacaaggcaaacgtattaatgcacgtcacgtacgtcaaatg
gaagctgcaaacttagcgaagctttctgtacctgatgaatatttatatgagcgtattact
gctgaagacatcacactgaaaagtggtgatgtgattcctgcaaatacggtgcttagccat
gaaatcatggtgaagatcgctgaaggtggcgttaaacagtttaacattctgtttacaaat
gacatcgaccgtggtcctttcgttgcggatacattacgtgcagatacaacaacaggtcgt
gaagaagcacttgttgaaatctataaagtaatgcgtccaggtgaaccaccgacgaaagaa
gctgctgagaacttattcaataacttattcttctcttctgagcgctatgatctttctcca
gtaggtcgtatgaagtttaaccgtcgtttgggtcgtccttacgaagtgggtactgatcag
aagtcacgtgaagttgaaggtattttatcgcacgaagatatcattgatgtactgcgtaca
ttggttgaaattcgtaacggtaaaggtgaagttgacgatatcgatcacttaggtaaccgt
cgtgtgcgttctgttggtgaaatgacagaaaaccaattccgtgttggtttagttcgtgtt
gaacgtgctgttaaagaacgtttaagccaagcagaaacagataacttgtctccgcaagat
ttaatcaacgcaaaaccagttgctgctgcaatcaaagaattctttggttcaagccaatta
tctcagttcatggaccaaaacaacccattgtctgagattacacacaaacgtcgtgtatct
gcgcttggtcctggtggtttgactcgtgaacgcgcgggcttcgaagtacgtgacgtacat
caaactcactatggtcgtgtttgtcctattgaaacgcctgaaggtccaaacattggtttg
atcaactcgctttctgtttatgcaaaagcgaatgacttcggtttcttggaaacaccatac
cgtaaagttgtagatggtcgtgtaacagatgatgttgaatatctatctgcaattgaagaa
gtgggtactgtcattgcacaggccgattccgcagtagataaagatggcaacttgactgaa
gaaatggtctctgtacgtcatcaaggtgaattcgtacgtatgtcgcctgagcgcgtaact
catatggacgtttctgcacagcaggtcgtttctgttgcagcatcattgattccattcctt
gaacacgatgatgcgaaccgtgcattaatgggttcaaacatgcaacgtcaggctgttcca
actttacgtgctgacaagccgcttgttggtacgggtatggaagcaaacgtagcacgtgat
tctggtgtgtgtgtgatcgccgatcgtggtggtgcaattgaatatgttgatgcatctcgt
atcgttattcgtgtaaacgaagatgaaatgatcgcaggtgaggcaggtgtggatatctat
aacctcatcaaatatacacgttcaaaccaaaatacatgtattaaccaaaatgttatcgtg
aaattaggcgacaaagttgctcgtggtgacatcttggctgacggtccatcgactgacatg
ggtgaacttgcgcttggtcaaaacatgcgtgtcgcgttcatgacatggaacggttataac
tacgaagactcgatcttattatctgagcgtgtacttcaagaagaccgtttaacgtcgatt
cacattcaagaattgtcatgtgtagcacgtgatactaagttaggagcagaggaaattact
gccgatattcctaacgtaggtgaagctgcactgtctaaattggatgagtctggtatcgtt
tatattggtgctgaagtgactgcgggtgatatccttgttggtaaagtaacgcctaaaggt
gaaactcaattaacacctgaagaaaaattacttcgcgcaatctttggtgaaaaagcggct
gacgtaaaagactcttctttacgtgttccgtctggtactaaaggtacggttatcgatgtt
caagtcttcactcgtgatggtttggaaaaagatgagcgtgcacaggcaattgaaaaagct
cagcttgatgcataccgtaaagacttgaaagaagaatacaaaatcttcgaagaagcagca
cgtgaacgtattgttcgtttgttgaaaggtcaagaatctaacggtggtggttcgactaaa
cgtggcgataaactttctgaagacgtattgtctggtttagagcttgttgatttacttgaa
atccagccaaatgatgaagcaattgctgagcgtttaactcaaattcaagtgttcttgaaa
gagaagagctacgagattgatgagaagtttgctgagaagaaacgtaaactttctacaggt
gatgaattaacaactggcgtattgaaagttgttaaggtttaccttgctgttaaacgtcgt
atccagcctggtgataagatggcgggtcgtcacggtaacaaaggtgttgtatcaaacatc
ttgccagttgaagacatgccgcatgatgcaaatggtgtaccagttgatatcgtgttaaac
ccactgggtgtaccatcacgtatgaacgtgggtcagattcttgagactcacttaggtatg
gcggcgaaaggtcttggtgataaaatcgagaaaatgttgaaagaacagcgtacagtttta
gaactacgtgatttcttagacaagatttataacaaggttggtggcgaacaagaagagctg
aatagcttaactgacgcagaaattttagcactttcgggtaacttgcgtgctggtgttcca
ttggcaacacctgtattcgatggtgctgaagaaagtcaaattaaagacttacttgaattg
gcagacatttcgcgtactggtcaaacggtattgtttgatggacgcacaggtgagcagttt
gatcgtcctgtaactgtaggttacatgtacatgctcaaattgaaccacttggttgatgac
aaaatgcatgcgcgttcaacaggttcttactcacttgttacacagcagccgcttggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaagtatgggcacttgaagcatac
ggtgcagcatatacactccaagaaatgcttactgttaagtcggatgacgtcgaaggtcgt
acacgcatctataagaacattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa
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