Anabaena sp. WA102: AA650_01190
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Entry
AA650_01190 CDS
T04059
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
awa
Anabaena sp. WA102
Pathway
awa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA650_01190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awa03019
]
AA650_01190
03400 DNA repair and recombination proteins [BR:
awa03400
]
AA650_01190
Enzymes [BR:
awa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AA650_01190
Messenger RNA biogenesis [BR:
awa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AA650_01190
DNA repair and recombination proteins [BR:
awa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AA650_01190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALB39260
LinkDB
All DBs
Position
complement(299365..300807)
Genome browser
AA seq
480 aa
AA seq
DB search
MNLPVTQSWQDVRAALKAIWGYDDFRPPQKEIVNCLISQKDALIIMPTGGGKSICFQLPA
LLKTGLTLIVSPLVALMENQVAELRQLSQKAALLHSELTASQRNATLQALEKQQLRLLYL
SPETLLSPAVWQKLCNPQLQINGLILDEAHCLVQWGDTFRPAYRRLGAVREALLKSKPPG
TKISIAAFTATADPLAQKIISTVLKLDKPEIFRINPYRENLNPIVRIAWTPKGRKQQLLK
FIQKRPNQVGLIYVRTRRDSENLTEWLTENGYQTASYHAGLSPTERRNIEASWLGGKIPF
VVCTCAFGMGINKSDVRWVVHFHAPHLLSEYVQEIGRAGRDGKPADVLTLVSEPTGFLDA
EDKQRQKFFESQMKLQQQKAQQLAKQLPLQGEINTVIKEFPNSAVALSLLHSNGQLAWLD
PFHYSMSLQSGNPEKTQLQATKQMSEYLTNKRCRWQFLLNAFGFETPTANWRCGHCDNCD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccctgtaacacaatcttggcaagatgttcgcgcagcattaaaggcaatttgg
ggatatgacgattttcgtcctcctcaaaaagaaattgttaactgtttaatatcacaaaaa
gatgctctaattattatgcccactggtgggggaaagtcaatttgttttcaacttcccgcc
ctcctaaaaacaggattgactttaatagtttctcctttggtggcactaatggaaaaccaa
gttgcggaattacggcaactatcacaaaaagcagcacttttacacagtgaattaactgca
tctcaacgcaatgcaaccttgcaagctttggaaaaacagcaattaagattattgtattta
tcaccagaaacattactcagtccagcagtatggcaaaagttatgtaatccccaactccaa
attaatggtttaattctggatgaagcccattgtttagtgcagtggggtgatacttttcgt
ccggcttatcggcgtttaggggctgtgcgtgaagctttgctaaaatcaaaaccaccagga
acaaaaattagtatagcagcttttacggcaacggctgatcctttagcccaaaagattatt
tctacagttttaaaattagacaaacctgagatttttcggattaatccctatcgggaaaat
ttaaatcctattgtccgaattgcttggactcctaaagggagaaaacaacaattattaaag
tttattcaaaaacgaccaaatcaagttggtttaatttatgtacggactcgaagagatagt
gaaaatttaacggaatggttaacagaaaatggttatcaaactgctagttatcatgcagga
ttgagtccaacggaacgccgcaatattgaagctagttggttaggtggaaaaatcccattt
gttgtgtgtacttgtgcttttgggatggggataaataaatcggatgtgcgctgggtggtt
cactttcatgcgccacatttattatctgaatatgtgcaagaaataggaagggcaggaaga
gatggcaaacctgctgatgttttaactttggtaagtgaaccgacgggatttttagatgct
gaggataagcaaagacagaagttttttgagtcacaaatgaaattgcaacaacaaaaagct
caacaattagccaaacaattaccactccaaggagaaataaatactgtaattaaagaattt
ccgaatagtgctgtggcactttctcttctgcatagtaatggacaattggcatggcttgat
ccttttcattattctatgtctttgcagtcaggaaatccagaaaaaacacaattacaagct
actaaacaaatgagtgaatatctcactaataaaaggtgtcgttggcaatttttattaaat
gcctttggctttgaaacaccaactgctaattggcgttgtggacattgtgataattgtgat
taa
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