Aliivibrio wodanis: AWOD_I_0010
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Entry
AWOD_I_0010 CDS
T03808
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta-subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
awd
Aliivibrio wodanis
Pathway
awd03030
DNA replication
awd03430
Mismatch repair
awd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWOD_I_0010 (dnaN)
03430 Mismatch repair
AWOD_I_0010 (dnaN)
03440 Homologous recombination
AWOD_I_0010 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
awd03032
]
AWOD_I_0010 (dnaN)
03400 DNA repair and recombination proteins [BR:
awd03400
]
AWOD_I_0010 (dnaN)
Enzymes [BR:
awd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWOD_I_0010 (dnaN)
DNA replication proteins [BR:
awd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWOD_I_0010 (dnaN)
DNA repair and recombination proteins [BR:
awd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWOD_I_0010 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
SLS
Motif
Other DBs
NCBI-ProteinID:
CED70108
UniProt:
A0A090ILL7
LinkDB
All DBs
Position
1:8877..9977
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AA seq
366 aa
AA seq
DB search
MKFSIERSLLLKPLQQVSGALGGRPSLPILGNILLQVENGQLSMTATDLEVELISKITLE
GDFEAGAVTVPSRKFLDICRGLPDSAAITIVLEGDRILVRSGRSRFTLATLPANDFPNIE
GWQSDVEITLSQAQLRKLIESTQFSMANQDVRYYLNGMMFETQGNIFRSVATDGHRMAVC
NMPIGPELPEQQVIMPRKGIQELVRLLDSPDQSVTLQFGNSNVRAEVNNFVFTSKLVDGR
FPDYRRVMPQSSNKTLEADCDELRQAFSRAAILSNEKFRGVRVNLANNQMRITANNPEQE
EAEEILDVDFQGDEIEIGFNVSYVLDVLNTLKCERVRISMTTANASALVEDCANDEAQYV
VMPIRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttctattgaacgcagtctgttattaaaaccactgcaacaagtatctggtgcc
cttggtggccgtccatcattaccgatcttaggtaatatcttacttcaggtagaaaatggt
caactgtcgatgacagcaaccgatttagaagtagaactgatcagtaaaataacgctagaa
ggtgattttgaagcaggtgctgtaactgtaccttcacgtaagtttttagatatttgtcgt
ggtttacctgatagtgcagccattacgatcgtattagaaggcgatcgtattttggttcgt
tctggccgcagtcgatttacattggcaacattaccagcaaatgatttcccaaacattgaa
ggttggcagagtgacgttgagatcactttatctcaagctcagcttcgtaagctaatagaa
agcacacagttttctatggcgaaccaagatgttcgttactacctcaatggtatgatgttt
gaaacgcaaggtaatatctttcgttcagttgcgacggatggtcatcgaatggccgtatgt
aatatgcctattggacctgaattacctgaacagcaagtgatcatgccgcgcaaaggaatt
caagaactggttcgccttcttgactcgccagatcagagtgttaccttacaatttggtaat
tcaaatgtgcgtgccgaagtgaataattttgtgtttacttctaagcttgttgatggacgt
tttcctgattaccgacgtgtaatgccgcaaagtagtaataaaacattggaagccgattgt
gacgaattacgccaagcgttttctcgtgctgcgatcttatctaatgaaaaattccgtggt
gttcgcgttaatttagcaaataaccaaatgcgtataacagcaaacaacccagagcaagaa
gaagcagaagagatcttagatgtagatttccaaggcgacgagattgaaattgggtttaat
gtaagttacgtattagatgtattgaatacattaaaatgtgagcgtgtgcgaatttcaatg
acaacagcgaatgcaagtgcgttagttgaagattgcgctaatgatgaagcacaatacgtt
gttatgccaatccgtctataa
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