Acetobacterium wieringae: CHL1_002866
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Entry
CHL1_002866 CDS
T08273
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
awi
Acetobacterium wieringae
Pathway
awi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
awi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHL1_002866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
awi03021
]
CHL1_002866
03400 DNA repair and recombination proteins [BR:
awi03400
]
CHL1_002866
Enzymes [BR:
awi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHL1_002866
Transcription machinery [BR:
awi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CHL1_002866
DNA repair and recombination proteins [BR:
awi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CHL1_002866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
URN86222
LinkDB
All DBs
Position
complement(2924180..2927836)
Genome browser
AA seq
1218 aa
AA seq
DB search
MLHPEKDGLRTRQSFSKIKEVIEMPNLIEVQKDSYNWFIEKGLKEVFDDIDKIEDYTGNL
VLEFVDYSIEGKPKYSVEECKERDQTYFIPLKVTVRLINKEKNEVKEQKVYMADLHKMTE
TGTFIVNGAERVIVSQLVRSPGAYFSLSRDKLGKKLFSAQVIPNRGAWLEYETDSNDIMY
VKIDRTRKLPITALIRALGLGTNQEILDFYGDDYRLIETIKKDENNNMKSTRDGLIEIYK
RLRPGEPPTVESAQSLLNSMFFDDRRYDLAKVGRHKYNKKLALATRIAGQRAAQAVVNPE
TGEVYVEEGEIISNDIATDIQNSGINVVDVRVDDKAVRVIGNGFVDINAQDLPFDISDLD
IKEYVCYEVLKEILESDMTDDEKKKSLKKRMDELVPKHVLISDLHASISYIIGLDYDIGA
IDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSVQDDEILTPQGLINTRPVNAA
LKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPI
ETPEGPNIGLIGSLSTYARVNEYGFIEAPYRKVYDGVVSDEIHYLVADEEGRYTIAQANE
PLDENNRFIRKQVTGRAGSKRDFVLIPPDRVDYMDISPKQIVSVATSLIPFLENDDANRA
LMGANMQRQAVPLLIPKAPVIGTGMEHKAAKDSGVCVIAKRAGTIERVEASAIHIRTENG
ELDKYTLLKFKRSNQGTCMNHKPLVNKGQVVQAGEIIADGPSTEMGELALGRNILMGFMT
WEGYNYEDAILINEKLLKEDVFTSIHIEEFEAEARETKLGPEEITRDIPNVSEDALKNLD
ERGIIFVGAEVKSDDILVGKVTPKGETDLSAEEKLLRAIFGEKAREIRDTSLKVPHGESG
IVLDVKVFSRENKDEDLKPGVNTLVRVLIAVKRKISVGDKMAGRHGNKGVISRILPEEDM
PFMPDGTALEIVLNPLGVPSRMNIGQVLEVHLGLAMRSIGWHIATPVFDPANEQDIMDLL
TQAGLPEDGKIQLYDGRSGEPFDNKVTVGYMYILKLHHLVDDKMHARSTGPYSLVTQQPL
GGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTIKSDDVVGRVKAYEAIVKGENIPKPGI
PESFKVLMKEFQSLGLDVNILNDQEVVKILDDEMDERDPLEELAIEIGSTELSEIGDDVK
LEDSFQIKSIDDDEDDLY
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcctgaaaaagatggtttaagaacacgccaaagcttttctaaaatcaaagaa
gttattgaaatgccgaacctgatcgaggttcagaaagattcatacaactggtttatcgaa
aaaggactcaaagaggtttttgacgatattgataaaatcgaagactacacgggaaatctg
gttttagaattcgtggattattccattgagggaaaaccgaagtattcagtggaggagtgt
aaagaaagggatcaaacctactttataccattaaaagtaacagttcgtttaattaataaa
gaaaagaacgaagttaaagagcaaaaggtttatatggccgatttgcataaaatgaccgaa
accggaaccttcattgtcaatggagcggaacgggttattgtcagccagctggtcaggtca
ccaggcgcctatttttccttgagccgtgataaactggggaaaaaactgttttcagcccag
gtcattccgaatcgtggggcctggttggaatacgaaacagattccaatgacatcatgtac
gttaaaatcgaccgaacccgtaaattaccgatcacagcactgattcgggctctgggattg
ggaaccaatcaggaaattcttgatttttacggcgatgactatcgattaattgaaacgatc
aaaaaagatgaaaataacaatatgaaatcaacccgggatggtctgattgaaatctataaa
agactgcgtcccggtgagccgccaactgtggaaagtgcccaatccctgcttaactccatg
ttttttgatgatcgccgctatgacctggccaaggtcggccgtcacaaatacaataagaaa
ttagccctggctacccgaattgccggtcagcgagccgcccaggccgtcgttaatccggaa
accggggaagtttatgtcgaagaaggcgaaattatctctaatgatattgccaccgatatc
caaaattccgggattaacgtggttgatgtccgggtggatgataaggcggttcgggttatc
ggtaacggctttgtcgacatcaacgcccaggacttaccctttgacatcagtgatctggac
attaaagaatatgtctgttatgaagtgctaaaagagattttagaatcagatatgacggat
gacgaaaagaaaaaatcccttaaaaagcggatggatgagctggttcccaagcatgtgctg
atctccgatctccatgcctcgatctcttatattattggtttggattatgacatcggcgct
attgatgatattgaccatttgggcaaccgtcgtttgcgttcggtcggcgaactgctgcaa
aatcagtttagaatcggtttgtcccgaatggaacgggtggtacgggagagaatgtcagtt
caggatgatgagattttaacccctcagggtttaatcaacacccgtccggttaatgccgcc
ttaaaagaatttttcggtagctcccagttgtcccagtttatggatcaaaccaacccattg
gccgaactgacccataagcgtcgtttatcagcattgggtcctggcgggttaagccgtgag
cgggccggttttgaggttcgagacgtccaccatagtcattacggtcggatgtgtccaatt
gaaactcctgaaggtcccaacattggactaatcggttcccttagtacctatgcccgggtc
aatgagtatggttttatcgaagccccctatcgaaaggtttatgatggcgtagtttccgat
gaaattcattatctggtcgccgatgaagaaggccgttacaccattgcccaggccaatgaa
ccattggatgaaaacaatcgctttatccgcaaacaggttacgggtcgtgctggcagcaaa
cgggatttcgtactgattcccccggatcgggtcgattacatggatatttcgccaaaacag
attgtttcggtggcgacatcgctgattcccttccttgaaaatgatgatgccaaccgggct
ctgatgggtgccaacatgcaacgtcaggcggtgccactgctgattcccaaagcaccagtt
attggtaccgggatggaacataaggccgccaaagactcgggtgtttgtgtgattgccaaa
cgagccggtaccatcgaacgggtagaggcctcagccattcacatccgcaccgaaaacggt
gaactggataaatataccttacttaaatttaaacgctccaatcagggcacctgtatgaac
cataaacctctggtcaacaaaggtcaagttgttcaggctggcgaaatcattgccgatggt
ccgtccaccgaaatgggcgaactggccctgggtcgaaacattctgatgggctttatgacc
tgggaaggttacaactacgaggatgccatcctgattaatgaaaaactgttaaaagaagat
gtctttacctcgatccatatcgaagaatttgaagccgaagcccgggaaaccaaactggga
ccggaagaaattacccgggatattcccaatgtcagtgaagatgcgctgaagaacctcgat
gaacggggaattatctttgtcggcgcggaggttaaatccgatgatatcctggtcgggaag
gtcacacctaaaggtgaaaccgatctgtctgccgaagaaaaactgctgcgggctatcttt
ggtgaaaaagcccgggaaatccgggatacctcactgaaagttccccatggagaatccggg
attgttctggatgttaaggtcttctcaagagaaaataaagatgaagatttaaaaccgggg
gttaataccctggtgcgggttctgattgccgttaaacgaaaaatctcagttggggataaa
atggcgggtcgccatggtaacaaaggggttatttcccgaattttgccggaagaagatatg
ccgtttatgccagacggaaccgctctggaaattgtgcttaatccgctgggggtaccttcg
cgaatgaatatcggtcaggtattggaagtccatctgggactggccatgcgatcaatcggc
tggcatattgccaccccggtttttgacccggccaatgaacaggacattatggatctgctt
actcaggcaggcttgccggaagatggtaagatccagctttatgatggccgtagcggggaa
ccctttgataataaggtaaccgtcggttacatgtatattcttaaacttcaccatttggtt
gatgacaagatgcatgcccgttcaaccggaccctactctttagtgacccagcaaccgttg
ggtggtaaagctcaattcgggggccagcgttttggagaaatggaagtttgggcgctcgaa
gcctacggcgccgcccataccctgcaggaaattttaacgattaagtccgatgatgtcgtc
ggccgggttaaagcctatgaagccattgtcaaaggcgaaaacattcccaaaccagggatt
ccggaatccttcaaagtactgatgaaagaattccagagtttgggtctggatgtcaatatc
ctaaatgaccaggaagttgtcaagattctggatgacgaaatggacgagcgggatccgctc
gaagaactggctatcgaaatcggcagcacggaactttccgaaattggcgatgacgtaaaa
ttggaagacagcttccagattaagagcattgatgatgacgaagacgacttatattaa
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