Acetobacterium woodii: Awo_c25340
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Entry
Awo_c25340 CDS
T01732
Symbol
uvrB
Name
(GenBank) excinuclease ABC, subunit B
KO
K03702
excinuclease ABC subunit B
Organism
awo
Acetobacterium woodii
Pathway
awo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
awo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Awo_c25340 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awo03400
]
Awo_c25340 (uvrB)
DNA repair and recombination proteins [BR:
awo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Awo_c25340 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Awo_c25340 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Kinesin
Microtub_bd
DUF87
Herpes_BBRF1
Motif
Other DBs
NCBI-ProteinID:
AFA49291
UniProt:
H6LE58
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All DBs
Position
complement(2963891..2965867)
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AA seq
658 aa
AA seq
DB search
MKEMKHAFKVVSEYEPKGDQGPAIEKISKGINEGLKYQTLLGVTGSGKTYTMAKVIEKVQ
KPTLVIAHNKTLAAQLTNEFRSFFPDNAVEYFVSYYDYYQPEAYVPHSDLFIEKDSSIND
EIDKLRHSATASLFERRDVIVVASVSCIYGLGSPIDYENLVLSLRPGMEKDRDAIIRKLV
DIQYTRNDIAFERNNFRVRGDILEIFPAASSEKAVRLEFFGDEIERITEINTLTGEIYGE
LTHVSIFPASHYTTTPENLERAIAGIQNEVRQRYDEYTNNNRLVEAQRILQRTNYDIEML
REMGYCNGIENYTRYINGLPPGSPPYTLIDYFPKDFLIIADESHVSIPQIGGMYAGDRAR
KSNLVDYGFRLPSAFDNRPLNFSEFEQKINQIVFTTATPSKYEKEHSQNIVELIIRPTGL
IDPEITVRPVAGQIDDLLGEIKMTTEKGNRVLVTTLTKKMAEDLTDYLKENGIAVNYLHS
DVDTIERMKILRDLRLGVFDVLVGINLLREGLDLPEVGLVAILDADKEGFLRSETSLIQT
VGRAARNLEGHVIMYADKITPSMDRAISETNRRRGIQTAYNEAHDITPSSVKKDIRAIIE
ATKVAETTETYEIGNDAVDIEVKIKELEVEMLTAAEALEFERAAKLRDEIHQLKEYQR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgaagcatgcatttaaggtggtatctgaatatgaacctaagggtgatcag
ggaccagccatcgaaaaaatatcaaaaggaattaatgaagggttaaaatatcaaacttta
ttgggcgtaactggctcgggaaaaacttacacgatggccaaagtgattgagaaggtccag
aaaccgacattagtgattgctcataataaaaccctggcggcacaattgaccaatgaattt
cgaagtttttttcccgacaacgcggttgaatatttcgttagttattatgattattaccaa
ccggaagcctatgtaccacactcggatctttttatcgaaaaagattcatcgatcaacgat
gagatcgataaactaagacattcggcaacggcatcattatttgaacgccgggatgtgatc
gttgttgccagtgtctcttgcatttacggattgggaagtcccatcgattatgaaaatctg
gttttatcgttacggccgggaatggaaaaagatcgtgacgcgataattcgcaaattagtg
gatattcaatatacccgtaatgatatcgcttttgaacgaaataattttcgggtcagaggg
gatattttagagatctttccggcggcgtcgtcagaaaaagcggtgcgactggaatttttt
ggcgatgaaatcgagcggatcaccgagattaataccttaaccggtgaaatttatggcgag
ttaacccatgtctcgatctttccggcttctcattatacaacaacaccggagaacttagag
cgagcgattgccgggattcaaaatgaagtgcggcagcgttatgatgaatataccaataat
aatcgtctggtggaagcccaacggattttgcaacggaccaattatgacattgaaatgctt
cgggaaatgggttattgcaatgggattgaaaattatacccgttatattaatggattgccg
ccaggttcgccaccatatactttgattgactattttcccaaggattttttaatcattgct
gatgaatcacatgtatcgattccccaaattggtggcatgtatgcgggagatagagcccgt
aaaagtaatctggttgattatggctttcggttgccgtcagcttttgataatcgaccactt
aacttttcagaatttgaacaaaaaattaatcagatcgttttcacgacggcgacacccagt
aaatatgaaaaagaacatagtcagaatattgttgagctgattatccgaccgacgggtctg
attgatccggagataacggttcggccggttgccggccagatcgatgatctgctgggagaa
ataaaaatgaccaccgaaaaaggaaatcgggttttagtcaccacattaacaaaaaaaatg
gccgaagatctgaccgattatctgaaagaaaacgggatcgcggttaattatctccattca
gacgtcgatacgattgaacgaatgaaaattctcagggatttaagactgggcgtttttgat
gtattagtggggattaacctgctccgagagggtcttgacttaccggaagtcggtttagta
gctattttggatgccgataaagaaggttttttgcgctccgaaacgtcgctgatccaaacg
gttggccgggctgcccgtaatttggaggggcatgtgattatgtatgccgataaaatcaca
ccatcaatggaccgcgcaatcagcgaaacaaatcgtcggcggggaattcagacggcctac
aacgaagctcatgacataacccccagctcagtcaaaaaagacattcgcgcgatcattgaa
gcaaccaaggttgccgaaacaacggaaacttatgagattgggaatgatgcggttgatatt
gaagttaaaattaaagaactcgaagttgagatgttgaccgccgccgaagccttggaattt
gaacgggcagctaaactacgcgatgaaatacatcagctgaaagagtatcaaagatga
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