Amphibacillus xylanus: AXY_20680
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Entry
AXY_20680 CDS
T02266
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
axl
Amphibacillus xylanus
Pathway
axl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXY_20680 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axl03021
]
AXY_20680 (rpoE)
03400 DNA repair and recombination proteins [BR:
axl03400
]
AXY_20680 (rpoE)
Transcription machinery [BR:
axl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXY_20680 (rpoE)
DNA repair and recombination proteins [BR:
axl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXY_20680 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
BAM48200
UniProt:
K0J042
LinkDB
All DBs
Position
complement(2169625..2170185)
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AA seq
186 aa
AA seq
DB search
MSIANTNRENLQEYSMIELAILVLEKTNKALNYREIFNQVADIKGYSESERHSNLALFYT
DLNLDGRFLTLGGGEWGLKKWYSVEQIDEVIQIEATPKKRKKKKKVVDPVEDDPIIDDAD
EDLTEVPLDIVGAAYKNTINDDDEDTLTLSDDIIDEEDFDDYDEDLDDEEDEDLDDEDDY
DDEDEL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaattgcgaatacaaaccgtgagaatttacaggaatactcgatgattgaattagca
atcctcgtattagaaaaaacaaacaaagcactaaattatagagaaatatttaatcaagtt
gctgatataaaaggttattcagagtcagagcgtcactcaaacttagctcttttctacact
gaccttaacttagacggccgctttttaacactaggcggcggtgagtggggtttgaaaaag
tggtattcagttgagcaaattgacgaggtcattcaaatcgaagcaacaccgaaaaaacgt
aagaagaaaaagaaagtggtcgatccagttgaagatgatccaatcattgatgatgcggat
gaagatttaactgaagttccactagatattgttggagctgcatataaaaatacaattaac
gatgacgacgaagatacattaacattaagtgatgacatcattgatgaggaagacttcgat
gattatgatgaagatctagatgatgaagaagatgaagatctagatgacgaagatgattac
gatgatgaggatgaactctaa
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