Achromobacter xylosoxidans NBRC 15126 = ATCC 27061: AX27061_0638
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Entry
AX27061_0638 CDS
T02964
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
axn
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Brite
KEGG Orthology (KO) [BR:
axn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
axn03016
]
AX27061_0638
Enzymes [BR:
axn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AX27061_0638
Transfer RNA biogenesis [BR:
axn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AX27061_0638
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
DUF7691
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
AHC45105
LinkDB
All DBs
Position
complement(677906..679813)
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AA seq
635 aa
AA seq
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MYVFYEDDGSFKAGHILSETDASLQVESESGKRSKIKRANTLFNFAAPEPAALMAQAAAL
AETLDLQFLWECAPQEEFESPALAADYFGHAPTPVEQAALLMRLHGAPAYFHRRGKGSYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEPIAQVAESLLIRPDKNSQQWKA
LDAACARLGKSPDRLLLELGAWPHALALHKRRFLAVNFPRGLAFPELELPPIDRELPLSD
AEIYSVDDVTTTEIDDALSVSTLPDGNLRVGIHVAAPGLTVTRDSEFDKLARARLSTVYM
PGDKIPMQPDNVIKAFSLDAGREVPVLSLYVVANPETGEVIESDTRLERVVVRENLRHNM
LDAQVTEDSLNDTSTDLPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGDP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLNQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWLKQHNITRTVAHVLREDLVRFANCPLVTRIGGMPELER
GTAVEVEILGMDELSLELDCRYVGQVGPAAEEAAA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagacgacggcagcttcaaggccggccatatcctgtccgaaacc
gacgccagcctccaggtggagtcggagtcgggcaagcgcagcaagatcaagcgcgccaat
acgctgttcaatttcgccgcgcccgaacccgccgcgctgatggcccaggcggccgcgctg
gccgaaaccctggacctgcaattcctgtgggaatgcgcgccccaggaggaattcgagtcc
ccggccctggcggccgactatttcggccacgcccccaccccggtcgagcaggccgccctg
ttgatgcgcctgcatggcgcgcccgcctatttccaccgccgcggcaagggcagttaccgc
cctgccccgcccgacatcctggccgccgccctggccgcgctggaaaagaaacagcgccag
gccgagcagcagcaggaatgggtggacgagatggccgccggccgcctgcccgagcccatc
gcccaggtcgccgaatcgctgttgatccggcccgacaagaattcgcagcaatggaaggcg
ctggacgccgcctgcgccaggctcggcaagagccccgaccgcctgttgctggaactgggc
gcctggccgcacgccctggcgctgcacaagcgccgcttcctggcggtgaactttccccgg
ggcctggcctttcccgagctggaactgccgccgatcgaccgcgaactgccgctgtcggac
gccgagatctattcggtcgacgacgtcaccaccaccgagatcgacgacgccctgtcggtt
tccaccctgcccgacggcaacctgcgcgtcggcatccacgtggccgcgcccggcctgacg
gtgacgcgcgacagcgaattcgacaagctggcgcgcgcgcgtctgtccacggtctacatg
ccgggcgacaagatcccgatgcagcccgacaacgtcatcaaggccttctcgctggacgcg
ggccgcgaggtgccggtgctgtcgctgtacgtggtggccaacccggagaccggcgaggtc
atcgaatccgacacgcgcctggagcgcgtggtggtgcgcgaaaacctgcgccacaacatg
ctggacgcccaggtcaccgaagacagcctgaacgacacttccactgacctgccctacggc
cactggctgcgcccgctgtggaagctggcgcaggccttgtcggcgcagcgcgagaacgtg
cgcggcaagcccgagaacaattcgcgggtggagtacagcttctacctggacggcgacccc
gacgatcccgacaccccggtgcgcctggtgccgcgccagcgcaacgcgccgctggaccgg
atggtggccgagtacatgatcctggccaataacctgtggggcggcctgctgaaccagcac
ggcgtgccgggcatctaccgctcgcaacaggccggccgtgtgcgcatgagcacccaggcg
ctgccgcacgaggccatcggcgtgccgcagtacgcctggagcacgtcgccgctgcgccgc
tacgtcgacctggtgaaccagtggcagctgatcgccgccgtcgagcacggcgtctcggcg
cgcctggtggctcccttcaaaccgcgcgacgcggatctgttcgcgatcatcggcgcgttc
gacgcgcagtacgcggcctgggccgagttccagagcgcgatggagcgctactggtgcctg
cgctggctcaagcagcacaacatcacccgcaccgtggcgcacgtgctgcgcgaagacctg
gtgcgcttcgccaactgcccgctcgtcacccggatcggggggatgcccgagctggagcgc
gggacggcggtggaggtggagattctggggatggatgagttgtcgctggagctggattgc
cggtatgtggggcaggtggggccggcggctgaagaggctgctgcttag
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