Aster yellows witches'-broom phytoplasma AYWB: AYWB_067
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Entry
AYWB_067 CDS
T00314
Symbol
nei
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ayw
Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ayw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AYWB_067 (nei)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ayw03400
]
AYWB_067 (nei)
Enzymes [BR:
ayw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AYWB_067 (nei)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AYWB_067 (nei)
DNA repair and recombination proteins [BR:
ayw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AYWB_067 (nei)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ABC65184
UniProt:
Q2NK59
LinkDB
All DBs
Position
80198..81028
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AA seq
276 aa
AA seq
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MPELPEVQIIVDFLKTQLIGKKIVATKVFYEPTVKNTKEFQKIEQTTILDIQRKGKFLLF
FLTQELVLIGHLRMEGKLFIKPCDEPKHKYEHFSIILGDKSSLRYYDFRKFGRFEVKNQN
IFLTQTTLHQLALDPFEINPVFLYQKILKTKSALKKVLLNQKIISGLGNIYVNEVLFLVK
LHPETKACELSLKQVQEIVTISQKVLAKAIKLGGTTVSTFESQPGIIGYFQNKLQVHGKV
NKPCINCQTKIIKIKVGGRGTYLCPICQNHNSNKEL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacctgaagtccaaattattgtagattttttaaaaacacaactaataggg
aaaaaaattgttgcaactaaggtattttatgagcctactgttaaaaataccaaagaattt
caaaaaattgaacaaactaccattttggatattcaaagaaaaggtaaatttttattattt
tttttaactcaagaattagttttgataggacatttgagaatggaaggaaaattatttatc
aaaccttgcgatgagcctaaacataagtacgaacatttttcaattattttaggagataaa
agttctttaagatattatgattttaggaaatttggtagatttgaagtcaagaatcagaac
atttttttaacccaaactaccttgcatcaactagccttagatccttttgaaatcaatcca
gtttttttgtatcaaaaaatattaaagaccaaaagtgctttgaaaaaagttttattaaat
caaaaaataatttctggattgggtaatatttatgttaatgaagttttgtttttagtaaaa
ttgcaccccgagactaaagcttgcgaactgtctttgaaacaagtgcaagaaattgttaca
atttcccaaaaagtgcttgccaaagccattaaactgggtggaactactgtaagtactttt
gaatctcaaccaggaattataggctattttcaaaataaattgcaagtacatggaaaagtt
aacaaaccttgcataaactgtcaaactaaaattattaaaattaaagttggtggtagaggc
acttatctttgtcctatttgtcaaaatcataattccaataaagaattatga
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