Azospirillum sp. B510: AZL_001090
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Entry
AZL_001090 CDS
T01169
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
azl
Azospirillum sp. B510
Pathway
azl02020
Two-component system
azl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
azl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AZL_001090 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AZL_001090 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azl03021
]
AZL_001090 (rpoN)
Transcription machinery [BR:
azl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AZL_001090 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Arg_repressor
HTH_38
Motif
Other DBs
NCBI-ProteinID:
BAI70747
LinkDB
All DBs
Position
119928..121544
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AA seq
538 aa
AA seq
DB search
MALAQRLDLRQAQTLVMTPQLQQAIKLLQLSNIELSDFVDREIEQNPLLERDGGPADGGS
DPVGEGSGGEAPGGLDGPGGMEANGLSADGLNGRDDGPALAPGDGRTRDTVEMTSSDTLA
SSSEAPLDTDFENVYSDDRFSDGSDGGSEVYGSYGERGGRSGFDDDDSNLEATLTSEKNL
RDHLTEQLKIDLPDHGDQLIGLALIDMLDEAGWLIGFDAGALADQLGCGVERVERVLAAC
QRFDPPGIFARSLKECLAIQLREKNRLDPAMAALLDNLELLAARNLPAIMKVCGVDAEDV
ADMVADIRKLNPKPALAFDHTPAQLVTPDILMRANPGGGWLIDLNPDTLPRVLVNHRYFA
RISDSARNKSDKEYISERFQSANWLVKSLHQRATTILKVASEIIRQQDAFFIHGVSHLRP
LILRDIAEAIGMHESTVSRVTTNKFMATPRGVFELKYFFTSAIQGADGQASHSAEAVRHR
IKTMIDAEKPDDVLSDDKLVEILRSEGIDIARRTVAKYREAMKIPSSVQRRRAKMSRM
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgctcaacgtctcgaccttcgacaagcccagacactggtgatgacaccgcag
ttgcagcaggccatcaagctgctgcaactgtcgaacatcgaactgtcggacttcgtcgat
cgcgagatcgagcagaatccgctgctggagcgtgacggcggcccggccgacggcggcagc
gatccggtgggagaggggagcggcggcgaggcgccgggcgggctggacggccccggcggc
atggaggcgaacgggctcagcgccgacgggctgaacgggcgtgacgacggcccggccctg
gcgccgggcgacgggcgcacccgcgacacggtggagatgacctcctcggacacgctggcc
tcctcgtcggaggcgccgctcgacaccgatttcgagaatgtctacagcgacgaccgcttt
tccgacggctcggacggcggcagcgaggtctacggctcctatggcgagcgcggcggccgc
agcggcttcgacgatgacgacagcaatctcgaagcgacgctgaccagcgagaagaacctc
cgcgaccacctgaccgaacagctgaagatcgacctgcccgaccatggcgaccagttgatc
gggctggccctgatcgacatgctggacgaggccggctggctgatcggcttcgacgccggg
gcgctggccgaccagctcggctgcggggtggagcgggtggagcgggtgctggccgcctgc
cagcgtttcgacccgcccggcatcttcgcccgctcgctgaaggaatgcctggccatccag
ctgcgcgagaagaaccggctggacccggcgatggcggcgctgctcgacaatctggagctt
ctggccgcgcgcaacctgccggccatcatgaaggtgtgcggcgtcgatgccgaggacgtc
gccgacatggtcgccgacatccgcaagctgaacccgaagccggcgctggccttcgaccac
accccggcccagctggtcacccccgatatcctgatgcgcgccaatcccggcggcggctgg
ctgatcgacctgaacccggacacgctgccgcgcgtgctggtcaaccaccgctatttcgcc
cgcatctccgacagcgcccgcaacaagtccgacaaggaatacatctccgaacgcttccag
tcggcgaactggctggtgaagtcgctgcaccagcgcgccaccaccatcctgaaggtggcg
agcgagatcatccgccagcaggatgccttcttcatccatggcgtctcgcacctgcggccg
ctgatcctgcgcgacatcgccgaagccatcggcatgcatgaaagcaccgtcagccgcgtc
accaccaacaagttcatggcgaccccgcgcggggtgttcgagctgaaatacttcttcacc
tccgccatccagggggccgacggtcaggcgtcccattccgcggaggcggttcggcaccgc
atcaagaccatgatcgacgccgagaagccggatgacgtgctgtcggacgacaaactggtg
gagattctgcgttccgaagggatcgacattgcgcgaaggacggtcgcgaagtatcgtgaa
gcgatgaaaataccgtcatcggtgcagcggcgacgcgccaagatgtcacgcatgtag
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