KEGG   Azospirillum sp. B510: AZL_015010
Entry
AZL_015010        CDS       T01169                                 
Symbol
hfq
Name
(GenBank) host factor-I protein
  KO
K03666  host factor-I protein
Organism
azl  Azospirillum sp. B510
Pathway
azl02024  Quorum sensing
azl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:azl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AZL_015010 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AZL_015010 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:azl03019]
    AZL_015010 (hfq)
   03036 Chromosome and associated proteins [BR:azl03036]
    AZL_015010 (hfq)
Messenger RNA biogenesis [BR:azl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AZL_015010 (hfq)
Chromosome and associated proteins [BR:azl03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    AZL_015010 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 EDC3_N LSM
Other DBs
NCBI-ProteinID: BAI72139
LinkDB
Position
complement(1735690..1735938)
AA seq 82 aa
MSEKSQNVQDVFLNHVRKNKTPVTVFLVNGVKLQGIITWFDNFSVLLRRDAHSQLVYKHA
ISTVMPAHPIQLFEPPKEGESV
NT seq 249 nt   +upstreamnt  +downstreamnt
atgtctgaaaaaagccaaaacgtgcaggacgtgtttttgaaccacgtccgtaagaataag
actcccgtaaccgtctttctcgtgaacggcgtgaaactccagggcatcatcacttggttc
gacaatttctccgtactgctgcggcgcgacgcgcactcccagctcgtctacaagcatgcg
atttcgaccgtcatgccggcccatcccattcaacttttcgagccgcccaaggaaggtgaa
agcgtctga

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