Azospirillum sp. B510: AZL_021320
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Entry
AZL_021320 CDS
T01169
Name
(GenBank) metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
azl
Azospirillum sp. B510
Pathway
azl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZL_021320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azl03019
]
AZL_021320
Messenger RNA biogenesis [BR:
azl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AZL_021320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
RNase_J_C
Motif
Other DBs
NCBI-ProteinID:
BAI72770
LinkDB
All DBs
Position
complement(2438484..2440169)
Genome browser
AA seq
561 aa
AA seq
DB search
MSEAPADSFVPEEDALYFLPLGGSGEIGMNLNLYGHRGKWLMVDLGISFADDTMPGLDVI
MPDPAFIAERRADLVGLVLTHAHEDHLGAVQYLWPELRCPVYCTPFTAAFLRAKLHEKGL
SSTVPIHEIPLGGTVEVGPFSVEYVTMTHSIPEPNALAIRTSAGTVLHTGDWKLDPDPLV
GETADEARLRAIGDEGVLALVGDSTNALVPGAAGSEATVRATLMELFGRYRDRRIAVSCF
ATNVARLESIAAAAAAHDRHVALVGRSLWRINEAARATGYLADVPKFLSEHDASYLPREK
LVLICTGSQGEPRSALARIAANDHPQVTLSRGDVVIFSSREIPGNERAIGRMQNQLVAQG
VELVTADEAAVHVSGHPARDELVRMYQWVRPRIAVPVHGEQRHQQAHAALAEDCQVAHSI
VPANGELLRLDGPEGARVVATVRAGRMAVDGKRLVPLDTGMMRARNRMVNNGAAVVTLVM
TATGELLTAPQLAVMGLVDEATDRDLLLDVVDAVRESVAMLPKSARADDAQVKEAARIAV
RRCFNASHGKKPVTEVHLVRV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccccggcggacagcttcgttccggaggaggatgcgctgtatttcctcccg
ctcggcggttccggcgagatcgggatgaacctcaacctctatggccaccgcggcaaatgg
ctgatggtggatctcggcatctccttcgccgacgacaccatgcccggcctggacgtcatc
atgccggacccggccttcatcgccgaacggcgggcggatctggtcgggctggtgctgacc
cacgcccatgaggaccatctgggcgccgtgcagtatctgtggccggagctgcgctgtccg
gtctattgcacgcccttcaccgccgccttcctgcgcgccaagctgcatgagaagggcttg
agcagcacggtgccgatccacgagatcccgctgggcggcacggtggaggtcggtcccttc
tccgtcgaatatgtcaccatgacgcattcgatcccggagccgaacgcgctcgccatccgc
acgtcggccggcacggtgctgcacaccggcgactggaagctggaccccgatccgctggtc
ggcgagacggccgacgaggcgcggctgcgcgccatcggcgacgagggggtgctggcgctg
gtcggcgacagcaccaacgccctggtgccgggggccgccgggtcggaggcgaccgtccgc
gccaccctgatggagttgttcgggcgttaccgcgaccgccgcatcgccgtcagctgcttc
gccaccaatgtggcgcggctggagagcatcgccgccgccgccgccgcccatgaccgccat
gtcgccctggtcggccgctcgctgtggcgcatcaatgaggcggcgcgggcgaccggctat
ttggcggatgtgccgaaattcctgtcggagcatgacgccagctatctgccgcgggagaag
ctggtgctgatctgcaccggcagccagggggagccgcgatcggccctcgcccgcatcgcc
gccaacgaccatccgcaggtgacgctgtcgcgcggcgacgtcgtgatcttctcctcgcgc
gagattcccggcaacgagcgcgccatcggccgcatgcagaaccagctggtcgcccagggg
gtcgagctggtgacggcggacgaggcggcggtccatgtctccggccatccggcgcgtgac
gagctggtgcgcatgtaccagtgggtgcggccgcgcatcgccgtcccggtccatggcgag
cagcgccaccagcaggcccatgccgccctggcggaggattgccaggtcgcccacagcatc
gtgccggccaatggcgagctgctgcggctcgacgggccggagggggcccgggtggtggcg
accgtgcgggccggccgcatggcggtcgacggcaagcggctggtgccgctcgacaccggc
atgatgcgggcgcgcaaccgcatggtgaacaatggcgccgccgtggtgacgctggtgatg
accgcgacgggcgagctgctcaccgcgccccagctggcggtgatggggctggtcgacgag
gcgaccgaccgcgacctgctgctggacgtcgtcgatgcggtgcgggaatcggtggcgatg
ctgccgaaatcggcgcgcgccgacgatgcccaggtcaaggaggcggcgcggatcgccgtc
cgccgctgcttcaacgcgtcccatggcaagaagccggtgacggaggttcatctggtccgc
gtctga
Azospirillum sp. B510: AZL_e04030
Help
Entry
AZL_e04030 CDS
T01169
Name
(GenBank) metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
azl
Azospirillum sp. B510
Pathway
azl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZL_e04030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azl03019
]
AZL_e04030
Messenger RNA biogenesis [BR:
azl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AZL_e04030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BAI76748
LinkDB
All DBs
Position
pAB510e:518802..520286
Genome browser
AA seq
494 aa
AA seq
DB search
MAPNNRARNQRPREDFDGARPPVSAAHGGGPTGPVPGKDEILFLPLGGCSRIGMNMALYG
HAGKWLIVDAGVAFVGDEMPGIDSLMADPTFIEERMQDVVGLVVTHAHEDHIGAIHHLWP
RLRCPIHASPFASHIIRERLKEKGAHRAAKVQTFEIGDTLTIGPFRIETIAVTHSIPEPM
SLAIRTAAGTVLHTGDWKFDPDPLIGRTTDFRALKRLGDEGLLAMMCDSTNADVPGSTGS
EADARAGLMAAFAGRSGAIAVTGFASNVARMTAVAEAAAAVGRKVVLVGRSMLRMEKAAQ
ACGYLDHVPEFMDVREASWTPRENLVFLCTGSQGEERAALSRLARNEHRDLWLEEGDTVI
FSARTIPGNEEALAEIHEHLRGMGVEIVTPADAPVHVSGHPKRDDLARMYGLVRPRFAVP
VHGTIEHMEAHARLARSCGVERALVPEDGDILRIAKEGTRVIAHIEPKRLANTGRELISW
VPPAAQAEAERVAA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaacaaccgcgcacgcaaccagcgtccgcgtgaggacttcgacggcgcccgc
ccgcccgtcagcgcggcgcatggcggcggccccaccggcccggttccgggcaaggacgag
atcctgttccttccgctgggcggctgttcccgcatcggcatgaacatggcgctctacggc
catgccggcaaatggctgatcgtcgatgccggcgtcgccttcgtcggcgacgagatgccc
ggcatcgacagcctgatggccgatccgaccttcatcgaggagcggatgcaggacgtcgtc
gggctggtggtgacccacgcgcacgaggatcatatcggcgcgatccatcacctgtggccg
cgcctgcgctgcccgatccatgccagccccttcgcctcgcacatcatccgcgagcggttg
aaggaaaagggcgcgcatcgcgccgccaaggtgcagaccttcgagatcggcgacacgctg
accatcggtcccttccggatcgagaccatcgccgtcacccattcgatccccgaaccgatg
tcgctggcgatccgcacggcggccggcacggtgctgcacaccggtgactggaagttcgac
cccgatccgctgatcggccgcaccaccgatttccgggcgctgaagcggctgggcgacgag
gggctgctcgccatgatgtgcgacagcaccaacgccgacgttcccggttcgaccgggtcg
gaggccgacgcccgcgccggcctgatggcggccttcgccggccggtcgggcgccatcgcg
gtgaccggcttcgcctccaacgtcgcccgcatgaccgcggtggcggaagcggcggcggcg
gtcgggcgcaaggtggttctggtcggccgctccatgctgcgcatggagaaggcggcgcag
gcctgcggctatctcgaccatgtgccggaattcatggatgtccgcgaggcgtcctggacc
ccgcgtgagaatctggtcttcctgtgcaccggcagccagggcgaggaacgggcggcgctg
agccgtctggcccgcaacgagcatcgcgacctctggctggaagagggcgacaccgtcatc
ttctccgcccgcaccatccccggcaacgaggaggcgctggcggaaatccatgagcacctg
cgcggcatgggggtggagatcgtcaccccggccgacgcgccggtccatgtctccggccac
ccgaaacgcgacgacctcgcccgcatgtatgggctggtgcgtccccgcttcgccgtgccg
gtccatggcaccatcgagcatatggaggcccacgcccgcctcgcccgttcctgcggcgtc
gaacgcgccctggtgccggaggacggcgacatcctgcgcatcgcgaaggagggcacccgc
gtgatcgcccatatcgagcccaagcgcctcgccaacaccggacgggagctgatctcctgg
gttccccccgccgcgcaagcggaagcggaacgggtcgcggcctga
DBGET
integrated database retrieval system