Azospirillum sp. B510: AZL_028630
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Entry
AZL_028630 CDS
T01169
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
azl
Azospirillum sp. B510
Pathway
azl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZL_028630 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azl03019
]
AZL_028630 (pnp)
03016 Transfer RNA biogenesis [BR:
azl03016
]
AZL_028630 (pnp)
Enzymes [BR:
azl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AZL_028630 (pnp)
Messenger RNA biogenesis [BR:
azl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AZL_028630 (pnp)
Transfer RNA biogenesis [BR:
azl03016
]
Prokaryotic type
tRNA degradation factors
AZL_028630 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
BAI73501
LinkDB
All DBs
Position
3284279..3286414
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AA seq
711 aa
AA seq
DB search
MSDGRKESMFTVHRKEIEWGGRKLVLETGKIARQANGAVLVTYGDTTVLCTAVAAKAPKP
GVDFFPLTVNYQEKAFAAGKIPGGFFKREGRPTEKETLVSRLIDRPIRPLFADGFRNETQ
VICTVLSHDLENDPDIVSMVGASAALTISGIPFLGPIGAARVGYKNGQYILNPTMDQVED
TDLDLVVAGTTEGVLMVESEAKELTEEVMLGAVMFGHSNFQPVINMIIDLAEEAAKEPWD
LPEPAYDRKALKARLRETVGAAVEAAYTETVKQSRYEKVGAAKAKALETLAEEFDAQSIG
FEFKELEADILRGAVLKTGRRIDGRDTKTVRPIVSEVGVLPRAHGSALFTRGETQALVVT
TLGTSQDEQIIDALEGEYREHFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIHPL
LPKKEDFPYTLRVVSEVTESNGSSSMATVCGTSLSLMDAGAPLARPVAGIAMGLIKEDHG
FAVLSDILGDEDHLGDMDFKVAGTEVGVTALQMDIKITSITEEIMKIALGQAKDGRLHIL
GEMAKALTGAREGVNENAPRITVINIPKEKIRDVIGSGGKVIREIVEQTGAKIDIDDDGT
VKVSAVDQKKSDAAIEWIKGIVAEPEMGVVYTGKVVKVVDFGAFVNFLGSRDGLVHISEL
AQQRVGKVSDVVSQGDSVKVKVIGFDDRGKVKLSMKQVDQATGEDLTKKAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggatggaaggaaagaatccatgttcactgttcatcgcaaggaaatcgagtggggc
ggccgcaagctggtcctggaaacgggcaagatcgcccgtcaggccaacggcgcggttctg
gtcacctatggtgacaccaccgtcctgtgcaccgccgtcgccgccaaggcgccgaagccg
ggcgtcgatttcttcccgctgactgtcaattaccaggaaaaggccttcgcggccggcaag
attcccggcggtttcttcaagcgcgaaggccgcccgaccgagaaggaaacgctggtcagc
cgcctgatcgaccgtccgatccgtccgctgttcgccgatggcttccgcaacgagacgcag
gtcatctgcaccgtgctgagccatgacctggagaacgacccggacatcgtgtcgatggtc
ggcgcctcggccgccctgacgatttccggcatcccgttcctgggtccgatcggcgccgcc
cgcgtcggctacaagaacggccagtatatcctgaacccgaccatggatcaggtcgaggac
accgatctggatctggtcgtcgccggcaccaccgaaggcgtgctgatggtcgaatcggaa
gccaaggagctgaccgaggaggtcatgctcggcgccgtcatgttcggtcacagcaacttc
cagccggtgatcaacatgatcatcgacctggccgaggaagccgccaaggagccgtgggac
ctgccggagccggcctatgaccgcaaggccctgaaggcccgcctgcgcgagaccgtcggc
gccgccgtcgaggccgcctataccgagacggtcaagcagtcgcgttacgagaaggtcggc
gccgccaaggcgaaggcgctcgagacgctggccgaggaattcgacgcccagtcgatcggg
ttcgagttcaaggagctggaggccgacatcctgcgcggcgccgtcctgaagaccggccgc
cgcatcgacggccgcgacaccaagaccgtgcgcccgatcgtgtctgaggtcggcgtgctg
ccgcgcgcccacggctcggccctgttcacccgcggcgagacccaggcgctggtcgtcacc
acgctgggcaccagccaggacgagcagatcatcgacgcgctcgagggtgagtaccgcgag
catttcatgctgcactacaacttccccccctattcggtgggtgaagccggccgcatgggt
tcgccgggccgccgcgagatcggccatggcaagctggcgtggcgcgccatccatccgctg
ctgccgaagaaggaagacttcccctacacgctgcgcgtggtgtcggaagtcacggagtcc
aacggctcctcctcgatggccaccgtttgcggcacctcgctgtcgctgatggacgccggc
gcgccgctggcccgtccggtcgccggcatcgccatgggcctgatcaaggaagaccacggc
ttcgccgtcctgtcggacatcctgggtgacgaggatcacctgggcgacatggacttcaag
gtcgccggcaccgaggtcggcgtcaccgcgttgcagatggacatcaagatcacctcgatc
accgaggagatcatgaagatcgcgctgggccaggccaaggacggccgcctgcacatcctg
ggcgagatggcgaaggcgctgaccggcgcccgtgaaggcgtcaacgagaacgccccgcgc
atcaccgtcatcaacatcccgaaggagaagatccgcgacgtgatcggctccggcggcaag
gtgatccgcgaaatcgtcgagcagaccggcgccaagatcgacatcgacgacgacggcacc
gtcaaggtctcggccgtcgaccagaagaagtcggatgccgccatcgagtggatcaagggc
atcgtcgccgagccggagatgggcgtcgtctacaccggcaaggtggtgaaggtcgtcgat
ttcggcgccttcgtgaacttcctgggttcgcgcgacggtctcgtccacatctccgaactg
gcgcagcagcgtgtcggcaaggtgtcggacgtcgtgtcgcagggtgactcggtgaaggtc
aaggtcatcggcttcgacgaccgcggcaaggtcaagctgtcgatgaagcaggtcgaccag
gccaccggcgaggatctgaccaagaaggcggagtga
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