Azospirillum sp. B510: AZL_028900
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Entry
AZL_028900 CDS
T01169
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
azl
Azospirillum sp. B510
Pathway
azl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZL_028900 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azl03021
]
AZL_028900 (rho)
03019 Messenger RNA biogenesis [BR:
azl03019
]
AZL_028900 (rho)
Transcription machinery [BR:
azl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AZL_028900 (rho)
Messenger RNA biogenesis [BR:
azl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AZL_028900 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
BAI73528
LinkDB
All DBs
Position
complement(3307065..3308501)
Genome browser
AA seq
478 aa
AA seq
DB search
MRPCPGRPGAFPSQRHPLPIRRDRVAASAAPTAPLPPSADHSAHPTPKATPPHDDFTGNP
MHLQELKCKSPAELLAFAEELQIENASTLRKQDMMFAILKQLAENDIPIFGDGVLEVLQD
GFGFLRSPEANYLPGPDDIYVSPSQVRRFGLRTGDTVEGQIRSPKDGERYFALLKVNTIN
FDAPDKVRHRINFDNLTPLYPEERIRMEVEDPTKKNLTGRIVDLVSPLGKGQRGLIVAPP
RTGKTVMLQNIAHSIATNHPEAYLIVLLIDERPEEVTDMARSVRGEVISSTFDEPATRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLSDKRTFPAIDI
SKSGTRKEELLVDKGTMSKMWILRRILMPMGVTDAVDFLVDKLKHTKSNNEFFESMNQ
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaccatgtcccggacgccctggcgcgtttccgtcccagcgccacccgctgcccatc
cgacgcgaccgcgttgcggcgtccgccgccccaaccgcccccctgccgccgtcggcggac
cattcggcacaccccacccccaaggccactcccccgcatgacgatttcacaggcaatccg
atgcatctccaagagctgaagtgcaaaagccccgccgaactgctggccttcgcggaggag
ttgcagatcgagaatgcgagcacgctgcgcaagcaggacatgatgttcgcgatcctgaag
cagctggccgagaacgacattccgatcttcggcgacggcgtgctggaggttctgcaggac
ggtttcggcttccttcgctcgccggaagccaattatctgccgggtcccgacgacatctat
gtcagtccgagccaggtgcgccgcttcggcctgcgcaccggcgacacggtggaggggcag
atccgctcgcccaaggacggtgagcgctatttcgccctgctgaaggtcaacaccatcaat
ttcgacgcgcccgacaaggtccgtcaccgcatcaatttcgacaatctgacgccgctctat
ccggaggaacgcatccggatggaggtcgaggatccgaccaagaagaacctgaccggccgc
atcgtcgatctggtctctcccctcggcaagggtcagcgcgggctgatcgtggcgccgccg
cgcaccggcaagacggtgatgcttcagaacatcgcccactcgatcgccaccaaccacccc
gaagcctatctgatcgtccttctgatcgacgagcgtccggaagaagtgacggacatggcc
cgctcggtccgtggcgaggtcatcagctccaccttcgacgagccggcgacccgccatgtc
caggtcgccgaaatggtgatcgagaaggccaagcggctggtcgagcacaagcgcgacgtg
gtgatcctgctggacagcatcacccgtctggcccgcgcctacaacaccgtcgtgccaagt
tcgggcaaggtgctgaccggcggcgtcgacgccaacgccctgcaacggcccaagcgcttc
ttcggcgccgcccgcaatgtcgaggagggcggctcgctgaccatcatcgccaccgcgctg
atcgacaccggcagccgcatggacgaggtgatcttcgaagagttcaagggcaccggcaac
tccgagatcgtgctggaccgcaagctctccgacaagcgcaccttcccggccatcgacatc
tccaagtcgggcacccgcaaggaggagctgctggtcgacaagggcaccatgtcgaagatg
tggatcctgcgccgcatcctgatgccgatgggcgtgacagacgcggtcgacttcctggtc
gacaagctgaagcacaccaagtcgaacaacgagttcttcgaaagcatgaaccagtag
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