Brucella abortus NCTC 10505: DO78_1939
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Entry
DO78_1939 CDS
T03686
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
babc
Brucella abortus NCTC 10505
Brite
KEGG Orthology (KO) [BR:
babc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
babc03400
]
DO78_1939 (addA)
Enzymes [BR:
babc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DO78_1939 (addA)
DNA repair and recombination proteins [BR:
babc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DO78_1939 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DUF6247
Exo5
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIJ57665
UniProt:
A0AAE9LD09
LinkDB
All DBs
Position
1:1963499..1967041
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AA seq
1180 aa
AA seq
DB search
MKKKPFIPPETIDAQARAADPSASVWVSANAGSGKTHVLTERVIRLLLEGTDPSKILCLT
YTKAAAAVMQNRVFMRLSEWAVLPDEALAERLEKLERRRPGAARLATARRLFARALETPG
GLKIQTIHAFCEAILHQFPLEANIAGHFEMMDDLMQAALVGEARRTLLETAYGGGDPALA
AAFAYVLQAAGETGLQSLLDEAVGRRNGLQLYLAELGVGTHRVEALHRAFGFEPDAREDD
LLADLWPVPEFSDDALDLILSIPKGASRAQDFALQLKRLEKASGLPDKIAVLRAAFLKST
GEPKSGSYVCSAAVKKLLPEFEEEFDTAAARVEMGLDRLKELRLVRLNLAALTLIDNLLQ
RYHDLKRRRGLLDFEDLITRTVALLARNGAGQWVQYKLDRGIDHILVDEAQDTSPDQWQV
IRMLSEEFFSGLGQRNVQRTLFAVGDEKQSIYSFQGAVPDDFAEQGRAISIQASNAELKF
ERVSLNFSFRSTPDVLQAVDEVFARPEANRGLSGATVHSAIRDKEPGEIEIWDMLTPEMV
EEPDDWRVPVDQLAVPAVRLAEQIAATIRYWLDRGEPIPGQNRKIAPRDIMVLVRKRDQF
MPALSRALKNLSVPVAGADRLQLTSHIAIQDLMALGRFVLQPSDDLSLAALLKSPLFGWD
DDRLFTLAYPRGAGDTLFEYLYRASRHDAELAQIHKLLSRWRNMADTMPVFEFYARVLSA
DGARRKLLARLGPEAGDIIDEFQNYALSAERAGLPGLQAFLETLEAAAPEIKRELDQGRD
EVRIMTMHAAKGLEGAVVFLVDPGSAVWTGSRAPKLIPYDFQGDGPPVKGFLWQPNSSCQ
TGFTAAEIEKLKNRAEEEYRRLLYVGMTRAEDRLIICGYRGTRESGETWHRLVEDALAAK
SETFVHPVTGVAARRYRKTPRSFIEINEEDQAGATSLPPLPHDYRQPMKAEPGLPRPLAP
SGASALIEADEEPPLDLSSPVLQPGTGAPAFALRRGTAIHMLLQYLPDVAPEKREHLAAD
YLARIAADWPDAERLKAWQSVHAILDDPRFGPVFAEGSRGEVAVMGMIDIGGRDHAVSGQ
IDRISVDESRVLIVDYKTNRPPPKTLEAVPSAYRAQLALYRELLRPLYPGRVVEAALLFT
EGPFLLLVPDAVLDDAMGALKDTQGKVRNQNLTDGGRRAT
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaacctttcatcccgccggaaaccatcgatgcgcaggcgcgcgcggccgac
ccgtcggcctccgtctgggtctcggccaatgccggttccggcaagacccatgttctgacc
gagcgcgtcatccgcctgcttctggaaggcacggatccgtcgaaaatcctctgcctgacc
tataccaaggcggcggcagcggtgatgcagaaccgcgttttcatgcggctttccgaatgg
gcggtcctgcccgatgaggccttggccgagcggcttgaaaaacttgagcgccgccgcccc
ggcgcggcgcgcctggccactgcacgccgtctctttgcgcgcgcgctggaaacgccgggc
gggctgaaaatccagaccatccatgccttttgcgaagccatcctgcaccagtttccgctg
gaagcaaatatcgccggtcattttgagatgatggacgatctcatgcaggcggcgctggtg
ggcgaggcgcggcgcaccctgcttgaaaccgcttatggcggtggtgatcccgcacttgcg
gcagcctttgcctatgtgttgcaggcggcgggcgaaacggggctgcaatcgcttctggac
gaggcggtgggccgccgtaacggcttgcagctttatctggctgaactgggcgtcggcaca
caccgtgtggaggctctgcatcgcgctttcgggtttgagcccgatgcgcgcgaagacgat
cttctggccgatctctggccggtaccggaattttccgacgatgcgctcgatctcatccta
tcgatcccgaaaggggcttcacgcgcgcaggatttcgcgctgcaattgaaacggctggag
aaggcgagcggccttcccgacaagattgcggtgctgcgcgccgctttcctcaagagcacg
ggcgagccgaaatcaggctcctatgtctgttcggcagccgtgaaaaagcttctgcctgaa
ttcgaggaggaattcgacacggctgcggcgcgggttgaaatggggctggaccgcctgaag
gaattgcgccttgtccggctcaatctggcggcgctcacgttgatcgacaatcttctgcaa
cgctatcacgacctgaagcgccggcgcggccttctggactttgaagacctgattacccgc
accgtggcgctgcttgcgcgcaatggggcaggccagtgggtgcaatataagctcgaccgc
ggcatcgatcatattttggtcgatgaagcgcaggatacgagccccgatcagtggcaggtc
atccgcatgttgtcggaggaatttttctccggccttggccagcgcaacgtccagcgcacg
ctttttgctgtgggtgatgaaaagcagtcgatctattccttccagggggccgtgccagac
gattttgccgagcagggccgggccatcagcattcaggccagcaatgcggagctgaaattc
gagcgcgtgagcctcaatttctctttccgttcgacgcctgatgtcttgcaggcggtggat
gaggtttttgcgcggccggaagctaacagggggctttccggtgcgacagtccactccgct
atccgggataaagaaccgggcgaaatcgaaatctgggacatgctgacgccggaaatggtg
gaagagccggacgattggcgtgtaccggtcgatcaactggccgtgccagcggtaaggctt
gccgaacagattgcggcaacgatccgctactggctggatcgcggggagccgatccccggc
cagaaccggaagatcgcgccgcgcgacatcatggtgctggtgcgaaagcgtgaccagttc
atgcctgccttgtcgcgcgcgctgaaaaacctgtcggttccggttgccggcgccgaccgt
ctgcaactcacgagccatatcgctattcaggacctgatggcgctggggcgtttcgtcctg
caaccgtccgacgatctgtcgctggcggcgcttctgaaaagcccgcttttcggctgggac
gatgaccggcttttcacgctggcatatccgcgcggggcaggggacacgctttttgaatat
ctctaccgcgcttcgcgccatgatgcggagctggcgcagattcacaagctgctgagccgt
tggcgcaacatggccgacaccatgccggtgtttgaattctatgcgcgtgttctcagtgcc
gatggtgcaaggcgcaagcttctggcgcgattggggccggaggcgggcgatatcatcgac
gaattccagaattatgcgctttccgccgagcgcgctggacttccgggtttgcaggccttt
ctcgaaacgctggaagcggccgcgccggagatcaagcgcgagcttgaccagggccgtgac
gaggtgcgcatcatgaccatgcatgccgcaaaggggctggaaggtgcggttgtcttcctc
gtggaccccggcagcgcggtgtggacgggaagccgtgcgcccaagcttatcccttatgat
tttcagggggatggcccgccggtgaagggctttttgtggcagccgaacagttcctgccag
acgggcttcacggcagcggaaatcgaaaagcttaaaaaccgcgccgaggaggaatatcgc
cgtcttctttatgtcggcatgacgcgcgcggaagaccggctcatcatttgcggttatcgc
ggcacgcgcgaaagcggcgaaacctggcatcggctggttgaggatgcgctggcagccaag
tccgaaacctttgttcatccggtcacgggcgtggctgcgaggcgctatcgcaagacgccg
cgcagttttatcgaaatcaatgaggaggatcaggccggggcgacgtctctgccaccgctt
ccccatgattatcgccagcctatgaaagcagagccgggtttgccgcgccccttggcccca
tcaggcgcttcggccttgatcgaggcggacgaggagccgccgctcgacctgtcgtccccg
gttttgcaacccggcaccggcgcaccggccttcgcgctgcggcgcggcacggcgatccac
atgctgctgcaatatctgccggatgtggcgccggaaaaacgcgaacatctggctgcggac
tatctggcgcgtattgccgcagactggccggatgccgaacggctcaaggcttggcagagc
gtccatgccattctggatgatccgcgctttggccccgtttttgcggaaggttcgcgcggg
gaagtggctgtcatgggcatgatcgatattggcgggcgtgaccacgccgtatccggccag
atcgaccgcatcagcgtggatgaaagccgtgtgctgatcgtcgattacaagaccaatcgc
ccgccgccgaagacgctggaagccgtgccttccgcctatcgcgcgcagcttgccctctac
agggaattgctgaggccgctttatcccggacgtgtggtggaagcggcattgcttttcacg
gaagggccatttctgttgctcgttcccgatgctgttctggatgatgccatgggagcgctg
aaggatactcaaggaaaggtgaggaaccagaacttgacggatggcggcagacgcgccaca
tga
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