Bacillus sp. S3: FAY30_00595
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Entry
FAY30_00595 CDS
T08283
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
baca
Bacillus sp. S3
Pathway
baca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
baca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FAY30_00595 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baca03021
]
FAY30_00595 (rpoB)
03400 DNA repair and recombination proteins [BR:
baca03400
]
FAY30_00595 (rpoB)
Enzymes [BR:
baca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FAY30_00595 (rpoB)
Transcription machinery [BR:
baca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FAY30_00595 (rpoB)
DNA repair and recombination proteins [BR:
baca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FAY30_00595 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QCJ40540
LinkDB
All DBs
Position
118966..122526
Genome browser
AA seq
1186 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGDPKYSVEESKERDVTYSAPLRVKVRLVNKETGEVKDQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYFSGKLDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNEYIRNTLEKDNTEGVDKALLEIYERL
RPGEPPTVDNAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAESLADPETG
EIIAEKGTLLDRRNLDRILPALEKNINFKSFNPVGGVVDEEVILQGIKIYAPGDENEKVI
NVLGNAYVAEPIKNITSADIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTATITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRFG
FIETPYRRVDPDTGKVTSRIDYLTADEEDNYVVAQANSRLGDDGSFLDDEVVARFRGENT
VVNRDRIDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPRVGTG
MEYVSGKDSGAAVICKHDGIVEHVEAREVWVRQTKEVDGQEVKGDLKKYRLLKFIRSNQG
TCYNQRPIVAVGNRVKKGEILADGPSMEVGELALGRNVLVAFMTWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERGIIRTGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKVFNREDGDEL
PPGVNQLVRVYIVQKRKIHQGDKMAGRHGNKGVISRILPEEDMPYLPDGTPVDIMLNPLG
VPSRMNIGQVLELHLGMAARYLGIHVASPVFDGATEEDVWDTIEEAGMSRDAKTVLYDGR
SGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMD
VKILSGDEEEIEMRDMEDEDDLQQVDTLNIVPETQNLESEKVGSKE
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccaacgaagaagttacgcacgaatc
agtgaagttttagaattaccaaatcttattgaaatccaaacctcttcatatcaatggttt
ctggatgagggattgcgtgaaatgttccaggatatttcgccaatcgaagactttactggt
aacctatcactagaatttattgattacagccttggcgatccaaagtattctgttgaagaa
tcaaaagaacgggacgttacatattctgctccattgcgtgtaaaagtacgtcttgtaaac
aaagaaactggcgaagtaaaagatcaagatgtcttcatgggtgattttccactaatgacg
gaaacgggtacgtttgtcattaatggagcagaacgcgttattgtttcacaattagttcgt
tcaccgagtgtttattttagcggaaaacttgataaaaacggcaaaaagggcttcacagcg
actgtcattccgaaccgcggcgcttggctggaatatgaaactgacgccaaagacgtcgta
tatgtgagaatagatcgtactcggaaactgcccgttacggttcttttgcgtgcactaggc
ttcggttccgatcaggaaatcattgatttgatcggggataacgagtatatccgtaacacg
cttgaaaaggacaacacagagggtgttgacaaagcgcttttagaaatttatgagcgtctt
cgtccgggtgaaccgccgaccgttgacaatgccaagagcttattggtgtcacgcttcttt
gaccctaagcgctatgatttagcgaatgttggccgttacaagattaacaaaaagctccat
attaaaaaccgtttattcaatcaacgcttagcggagtcacttgccgatccagaaacaggc
gaaattattgctgaaaaaggtacactccttgataggagaaaccttgacagaattttgccg
gctcttgaaaagaatattaatttcaaaagctttaatcctgttggcggagtagtggatgag
gaagtcatccttcaaggcattaaaatttacgctcctggcgatgaaaatgaaaaagtgatt
aatgtattgggcaatgcctatgtggctgaaccaattaaaaatattacatcggcagatatt
attgcatcgattagctacttcttcaatttattgcacggagtaggcgatacagatgatatt
gaccatctaggtaacagacgtcttcgttctgtcggagagctgttgcagaatcaattccgg
attggtttgtcgcggatggagcgagttgttcgtgaaagaatgtccattcaagacacagca
acgattacaccgcagcaattgattaatattcgtcctgtcattgcgtcgattaaagagttc
tttggaagctctcaattatcacaattcatggatcaaacgaacccgcttgctgaattaact
cataagcgtcgtttatctgcactcggaccgggtggattgacacgtgagcgtgccggcatg
gaagtacgtgacgttcactattcacactacggccgtatgtgtccgattgaaacaccggaa
ggtccaaacatcgggctgattaactcattatcatcgtacgcgaaggtaaaccgcttcggc
tttattgaaacaccgtaccgccgtgttgaccctgacaccgggaaagtaacgagccggatc
gattacttaacagcagatgaagaagataattacgtggtagcccaagcgaactcccgtctt
ggtgacgatggttcattccttgatgatgaagttgttgctcgtttccgcggtgaaaacacg
gttgtaaatcgggaccggatcgattacatggatgtatcgccaaagcaggttgtttctgcg
gcaacagcatgtatcccgttccttgaaaatgatgactcaaaccgtgccttgatgggtgcg
aacatgcagcgtcaggcagtgccgctcatgcagccggaggcccctagggttggaacaggt
atggaatatgtttcaggtaaagactcaggtgccgccgttatatgtaaacatgacgggatt
gtcgaacatgttgaagctcgtgaagtatgggttcgtcaaacgaaagaagtagatggccaa
gaagtaaaaggcgatcttaaaaaatatcgactgttgaaatttatccgctccaaccaaggt
acctgctataaccaacgtccaatcgttgctgtcggcaaccgggtgaaaaaaggcgaaatt
cttgctgacggcccttcaatggaggttggtgaattagcccttggacggaacgttctagtt
gcctttatgacatgggatggctataactatgaagatgccatcatcatgagtgaacgttta
gttaaagatgatgtatatacctctattcatattgaagaatatgagtcagaatcacgtgat
acaaaacttggaccagaagaaattacccgtgacattccaaacgttggggaagatgccctt
cgtaatttggatgaacgcggtattattcgcactggtgctgaggtgaaggacggagatctc
ctcgttggtaaagtaacgcctaaaggtgtgacagaattaacagctgaagaacgtctttta
catgctattttcggtgaaaaagcacgtgaagtacgcgatacttcactaagagttccacat
ggcggcggtggtattgtacatgatgtgaaggtctttaaccgtgaagacggcgatgaactt
ccaccgggtgtaaaccagcttgtccgtgtctatatcgttcagaagcgtaagatccatcaa
ggggataaaatggctggacgccacggtaataaaggggttatttcccggattttacctgaa
gaggatatgccttatttacccgatggtacacctgttgacatcatgttgaatcctttaggg
gttccatcacggatgaacattggtcaggtgttagaacttcatcttggaatggcggcacgc
taccttggtattcacgtggcatctccggtatttgacggagcaactgaggaagatgtgtgg
gatacaattgaagaggctggcatgtcacgcgatgcgaaaactgtcctttatgatggacgc
tccggcgagccattcgataaccgtgtctctgttggtgttatgtatatgattaaacttgca
cacatggttgacgataagctccatgcacgttcaactggaccatactcacttgttacacag
cagcctcttggcggtaaagctcaattcggcggacagcgctttggtgagatggaggtttgg
gcacttgaagcgtacggtgcagcatatacacttcaagaaattctgaccgttaaatcagat
gacgtggttggccgtgtgaaaacatatgaagccattgtcaagggcgagaatgtccctgaa
ccaggcgttcctgagtcattcaaagtattaattaaagaacttcaaagtcttggtatggat
gtaaaaatcctttccggcgatgaagaagagatagaaatgcgcgatatggaggatgaagac
gacttacagcaagtcgatacattaaacatcgtgcctgaaacacaaaacttagaatcagaa
aaagtaggttcaaaagaataa
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integrated database retrieval system
