Bacillus sp. S3: FAY30_05725
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Entry
FAY30_05725 CDS
T08283
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
baca
Bacillus sp. S3
Pathway
baca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAY30_05725 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baca03019
]
FAY30_05725 (recQ)
03400 DNA repair and recombination proteins [BR:
baca03400
]
FAY30_05725 (recQ)
Enzymes [BR:
baca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAY30_05725 (recQ)
Messenger RNA biogenesis [BR:
baca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FAY30_05725 (recQ)
DNA repair and recombination proteins [BR:
baca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FAY30_05725 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Sigma70_r4_2
PCI
Motif
Other DBs
NCBI-ProteinID:
QCJ41436
LinkDB
All DBs
Position
1213980..1216130
Genome browser
AA seq
716 aa
AA seq
DB search
MKGETILFEKTLPLLNSYFGYSSFRNGQEQAIRSVLAGNNTICVMPTGGGKSICYQIPAL
VLPGTTIVISPLISLMKDQVDTLIQAGIPATFINSSISYSEANKRIYEAKHGKYKLLYIA
PERLESFEFVEDLKNMDIPLVAVDEAHCISQWGHDFRPSYRHIQQMIHSLPQQPNVLALT
ATATPRVRDDICELLNINERNTIITGFERENLSFSVIKGQDRQRFLLDYLKKNEQEAGII
YAATRKNVDQLYEKLRKENVNVARYHAGMGDVDRAREQERFLEDKASVMVATSAFGMGID
KSNIRYVVHYQMPKNMESYYQEAGRAGRDGLDSECIMLYSPQDVQVQRFLIDQSSDRSRM
TQELEKLQQMADYCHTENCLQEFILNYFGETDTDACGRCGNCLDSRASIDVTKEAQMVMS
CVIRMGQRFGKNITAQVLTGSKNKKVIEMGFERLTTYGIMKDQGAKEVSDFIEFLISQEL
LAIEQGQFPTIYVSPKGKDVLLGNEQVYRREAVKVKQVSKNDPLFEELRDVRRRIAETEK
VPPFVIFSDAALKDMCARLPKTSEEFLQVSGVGEHKLKKYGLEFIQAIRAFLETNPDYRS
EIQPESAASKKAAKKTAVGESHLETLTLNQKHLSIEEIAEQRELAVSTVENHLLQCAQQG
MEVDFSRHIPSEYLPLLEKAVEEAGRERLKPIKELLPEEVNYFMIKVYVYYLSRKK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagaaacaatcttgtttgaaaaaacactcccactactcaattcctatttcggt
tatagctccttccgtaacggtcaagaacaggcaatccgttcggtattagccggcaataat
acgatttgtgttatgccgaccggaggcggtaaatccatctgttatcaaattcctgcactt
gtccttccgggtaccacgattgttatttccccactgatatctttaatgaaggatcaggta
gataccctcattcaagcgggaatcccagccacttttattaatagttcgataagttacagc
gaggcaaataagcggatctatgaagcaaaacatgggaaatacaagcttttatacatagca
ccagagagattagaatcatttgaatttgtagaagacctgaaaaacatggatatcccactt
gtcgccgtcgacgaagctcactgtatctcgcagtggggacatgatttccgcccaagctac
cgtcatattcaacaaatgattcatagtctgccgcagcagccaaatgttcttgccttaacg
gcaacagcaacgccgagagttcgtgatgatatttgcgagctgttaaatattaatgaaaga
aatacaattatcacagggtttgagcgagaaaacctatctttctcggtgatcaaagggcag
gacaggcaaaggtttctcctggattatctaaaaaagaatgaacaggaagcggggattatt
tatgcagcaactcgaaagaatgttgatcagctttatgaaaagctccgtaaagagaacgtc
aatgttgcccgctaccacgcgggcatgggtgacgtggaccgcgctcgtgagcaagaacga
tttttagaagataaagcatccgttatggttgcgacctctgcctttgggatggggatcgat
aagagtaatatccgctatgtagttcactaccagatgccgaaaaacatggagagctattat
caggaagctggacgtgccggacgggacgggctagacagtgaatgtattatgctgtattcg
ccgcaagatgttcaggtgcagcgctttttaattgaccaatccagtgacaggagccggatg
acacaggaattagagaaactgcagcagatggctgattattgccatacggaaaactgcttg
caggagttcattttaaactattttggcgaaacagacacagatgcttgtggcagatgcggc
aactgtttggattccagggcaagcattgatgtcacgaaggaagcacaaatggtgatgtcc
tgtgtgattcgaatggggcagcgttttgggaaaaacattactgcacaggtgttaacggga
tcgaaaaataaaaaagtaatcgagatgggctttgagcggcttacgacctatggaatcatg
aaagatcaaggtgcgaaagaggtcagcgattttattgagtttttgatttcacaggagtta
ctcgcgattgaacaaggacaatttccgacgatttatgtttcaccgaaaggaaaggatgtt
cttttaggtaatgagcaggtttatcgaagagaagcggttaaagttaaacaagtatcgaaa
aatgatccgttatttgaggagctgcgggatgtccgcagaaggatagccgaaacggaaaaa
gtaccgccattcgttattttttcagacgctgcccttaaagacatgtgtgcaagacttccg
aaaacaagtgaagaatttttacaggtcagcggggttggggagcataagctgaagaaatac
ggacttgaattcattcaagccatccgtgcttttttagaaaccaatccggattatcgaagc
gaaatccaaccagaatcggcagcatcgaaaaaggctgctaaaaaaacggcggttggggaa
tcgcatttggagacattgacattaaatcaaaagcacctatcgattgaggaaattgctgaa
caacgcgagcttgcggtcagcacagtggaaaaccatttacttcaatgtgctcagcaaggt
atggaggtggacttttccaggcatattccaagtgaatacctgccactgttagaaaaggcc
gtggaagaagccggacgtgaacggttaaaaccaatcaaggaactccttccagaagaagtt
aattactttatgataaaagtgtatgtttattatttaagtagaaagaagtag
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