KEGG   Bacillus sp. S3: FAY30_09575
Entry
FAY30_09575       CDS       T08283                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
baca  Bacillus sp. S3
Pathway
baca02024  Quorum sensing
baca03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:baca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FAY30_09575 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FAY30_09575 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:baca03019]
    FAY30_09575 (hfq)
   03036 Chromosome and associated proteins [BR:baca03036]
    FAY30_09575 (hfq)
Messenger RNA biogenesis [BR:baca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     FAY30_09575 (hfq)
Chromosome and associated proteins [BR:baca03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    FAY30_09575 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QCJ42132
LinkDB
Position
1998396..1998626
AA seq 76 aa
MKTTINIQDQFLNQCRKDNTHVTVFLLNGFQLRGQIKGFDNFTVLFESEGKQQLVYKHAI
STFAPQRNVQLELDPQ
NT seq 231 nt   +upstreamnt  +downstreamnt
atgaaaacaacgattaatattcaagaccaatttttaaaccagtgccggaaagataatacc
catgtaacggtgttccttcttaacggttttcaattacgaggccaaattaaggggtttgat
aactttactgtcctttttgaatcagaggggaaacagcaattggtctataaacacgccatt
tcgacttttgcaccacaaagaaatgtgcagcttgaattggatccccaataa

DBGET integrated database retrieval system