Bacillus sp. FJAT-18017: AM500_00270
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Entry
AM500_00270 CDS
T10545
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bacf Bacillus sp. FJAT-18017
Pathway
bacf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bacf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AM500_00270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacf03021
]
AM500_00270
03400 DNA repair and recombination proteins [BR:
bacf03400
]
AM500_00270
Enzymes [BR:
bacf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AM500_00270
Transcription machinery [BR:
bacf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AM500_00270
DNA repair and recombination proteins [BR:
bacf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AM500_00270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ALC88412
LinkDB
All DBs
Position
complement(40920..44480)
Genome browser
AA seq
1186 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGDPKYSVEESKERDVTYAAPLRVKVRLVNKETGEVKDQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSGKLDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNEYLRNTLEKDNTDSIEKALLEIYERL
RPGEPPTVENAKSLIISRFFDPKRYDLASVGRYKINKKLHIKNRLFGQRLAEALVDPETG
EILAEAGTLLDRRNLDRIIPALEKNINMYSYQPGGTVIEGDVVLQSIKIFAPTDDNEKVI
NILSNAYVPEPIKNITPADIISTISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTATITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRFG
FIETPYRRIDPETGKVTDRIDYLTADEEDLYVVAQANARLDDDGTFLDEDVVARFRGENT
VVARERIDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPRVGTG
MEHVSAKDSGAAVICKHEGIVEHVEAREVWVRRVKEIDGNEVKGDLDKYRMLKFIRSNQG
TCYNQRPIVSVGDRVTKGEILADGPSMEKGELALGRNVLVAFVNWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERGIIRIGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKVFNREDGDEL
PPGVNQLVRVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPYLPDGAPVDIMLNPLG
VPSRMNIGQVLELHLGMAARALGIHVASPVFDGATEEDVWSTIEEAGMARDAKTVLYDGR
TGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMD
VKILSGDEEEIEMRDLEDDDDMQQVDTLTIAPESQNFESEKVGSKE
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccaacgaagaagttacgcgcgaatc
agtgaagttttagaattaccaaatctaattgaaatccaaacctcttcttatcaatggttt
cttgatgagggactgcgtgaaatgttccaggatatttcaccgattgaagactttactggt
aacctatctctagaatttattgattatagccttggcgatccgaaatattccgttgaggaa
tcaaaggaacgggatgttacatatgcagcaccattgcgtgtaaaagtgcgtctcgtcaac
aaagaaacaggggaagttaaagaccaggatgttttcatgggcgatttcccgcttatgaca
gaaactggcacgttcgtcatcaatggtgcggagcgtgttatcgtttcccagcttgtacgt
tctccgagcgtatattacagcgggaagctagataaaaacggtaaaaaaggttttactgca
accgttattccgaaccgcggcgcatggcttgagtatgaaacagatgccaaggacgtcgta
tacgtcaggatagatcgtacaaggaaactcccagttacggttcttttgcgtgcgcttggg
ttcggctctgatcaagaaatcatcgacctcattggcgacaatgagtatctccgcaataca
ctggaaaaagacaataccgacagcattgaaaaagctttgcttgaaatctacgaaaggctt
cgcccgggcgaaccgcctacagtagaaaatgcgaagagccttattatttcgcgctttttt
gacccgaaacgttatgatttagcgagtgtaggccgttataaaatcaacaagaagctccat
attaaaaaccggctttttggacagcggctcgcggaagcactggttgatcctgaaacaggt
gaaatccttgctgaagcaggcactcttcttgaccgcaggaacttggatcggattattcct
gcccttgaaaagaatatcaatatgtatagctatcagcctggaggcaccgttattgaaggt
gatgttgtccttcagagcatcaagatttttgctccaacagatgacaatgaaaaagtcatc
aatattttgagtaatgcatatgtacctgagccaataaagaacattactcctgctgatatt
atttcgacaatcagttatttcttcaatctgcttcatggagtgggagatactgacgatatt
gaccatcttggaaaccgccgccttcgctctgtaggggaattgttgcaaaaccaattccgt
atcggtttatcaaggatggagcgtgtggttcgtgagcggatgtccattcaggatacagct
acaatcacgccgcagcagctgatcaatatccgaccggtcattgcttcaattaaagagttc
tttgggagctctcagctttcccagttcatggaccaaaccaacccgcttgctgaattgacg
cacaaacgccgtctttctgcactcggaccgggtggtctgacacgtgagcgtgcaggcttt
gaagttcgtgacgttcactattcccattacgggcgtatgtgtccgattgaaacacctgaa
ggaccgaatattggcttgatcaactcactttcatcctttgcgaaagtgaacaggtttggc
tttattgaaacaccataccgcagaattgaccctgaaacaggcaaagtgacggacagaatt
gactaccttacagcggatgaagaggatctttatgttgttgcgcaggcaaatgcgcgtcta
gacgacgatggcactttccttgatgaagatgttgttgcacgcttccgcggtgaaaacact
gtagtagcgcgtgaacggatcgattatatggatgtatcgccgaaacaggtagtatctgct
gcgaccgcatgcattccgttccttgaaaacgatgactcaaaccgtgctcttatgggtgct
aacatgcagcgtcaggctgtgcctcttatgcagccggaagccccaagagttgggacaggt
atggaacacgtatctgccaaggactcaggtgctgctgttatatgtaaacacgagggtatc
gttgaacatgttgaggcccgtgaagtctgggtgcgccgtgttaaggagattgatggtaac
gaagttaagggtgaccttgataaatatcgcatgctgaaatttattcgctccaaccaggga
acttgttataaccagcgcccaattgtttcagtgggtgaccgagtaacaaaaggcgagatt
ttggctgatggtccatccatggaaaaaggcgaactggctcttggccggaacgtactagtg
gcatttgttaactgggatggctataactatgaagatgcaatcatcatgagcgagcgcctt
gttaaagatgatgtgtatacctctatccatattgaagaatatgaatcagagtcccgtgat
acaaagcttggacctgaagaaattactcgtgatattccgaatgttggggaagatgcgctt
cggaatctggatgagcgtggaattatccgcattggcgcggaggttaaagatggtgatctg
cttgtaggaaaggtaacgcctaaaggtgtaactgaactgacagcagaagagcgcttgctc
cacgcaatctttggcgagaaagcccgggaagtacgggatacgtcactccgtgtaccacat
ggcggcggtggaattgtccatgatgtaaaagtcttcaaccgtgaagatggggatgaactc
cctccaggtgtaaaccagttagtccgtgtctatatcgttcagaaacgtaaaattcacgaa
ggcgataagatggcgggacgccacggaaacaaaggggtaatttcccgcatacttcctgaa
gaggatatgccgtacctgccagatggtgcaccggttgatatcatgctgaaccctcttggg
gttccatctcgtatgaatataggacaggtgctagagctccatcttgggatggcagctagg
gcactgggcatccacgtagcatcaccggtatttgacggtgctaccgaagaagatgtatgg
tcaacgattgaggaagctggaatggcccgcgatgccaagaccgtcctttatgatggacga
acaggcgaaccttttgacaaccgggtttctgttggtgtcatgtatatgatcaagcttgct
cacatggttgatgataaacttcacgctcgttcgactggcccgtactcacttgttacgcag
cagcctcttggcggtaaagctcagtttggcggacagcgtttcggtgagatggaagtttgg
gcacttgaagcatacggtgctgcctatacattgcaagaaatcctcactgttaaatccgat
gatgtagtcggacgcgtgaagacatacgaggcaatcgtaaaaggtgagaatgtaccggaa
ccaggtgttccagaatcatttaaagtattaattaaagagcttcaaagccttggtatggat
gtcaagatcctatccggtgatgaagaggaaatagaaatgcgtgaccttgaagatgatgat
gatatgcagcaggttgatacattgacaattgcgccagaatcacaaaacttcgagtctgaa
aaagtaggttccaaagaatag
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