Bacillus sp. 1s-1: CJO35_19935
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Entry
CJO35_19935 CDS
T11357
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bacj Bacillus sp. 1s-1
Pathway
bacj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bacj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CJO35_19935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacj03400
]
CJO35_19935
Enzymes [BR:
bacj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CJO35_19935
DNA repair and recombination proteins [BR:
bacj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CJO35_19935
Prokaryotic type
CJO35_19935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
UPA_SH3BP4
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
ASV17304
LinkDB
All DBs
Position
complement(3804388..3805065)
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AA seq
225 aa
AA seq
DB search
MKQILNDSWWQQLKDEFDKPYYQELREMLKREYAEHTVYPEPNDIYNALHYTSYENVKVV
ILGQDPYHGPGQAHGLSFSVQPGVNPPPSLKNIFIELQNDIGADIPNHGSLVSWAKQGVL
LLNTVLTVRRGQANSHKGKGWEQLTDSIIDVLNKRDKPVVFILWGRHAQMKKERIDTSKH
FIIQSPHPSPFSARNGFFGSRPFSRANQYLEQIGDEPIDWSLPNL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacagattttgaatgacagctggtggcaacagctgaaggacgagtttgataagcct
tattatcaagaactgagggaaatgctgaaaagggagtatgctgaacacaccgtatatcct
gaaccgaacgatatatacaatgctttgcattatacttcctatgaaaatgtgaaagtcgta
attctcggccaagacccgtatcacggtccgggtcaggcccatggcttaagtttttccgta
caacccggcgtcaatccaccgccttctttgaaaaatatttttatagaattgcagaatgac
atcggcgccgacatcccgaatcacggttctctcgtcagctgggctaagcaaggcgttctg
ctgctgaacaccgttttgaccgtgagacggggccaggcaaattcgcataaagggaaaggc
tgggaacagctcacagatagtataatagatgttttaaacaaaagagacaaaccggtcgtt
tttattctctggggccggcatgcccaaatgaaaaaagaacgaatcgatacatccaagcat
tttattatccaatcgccgcatccgagcccgttctcggctagaaacgggtttttcgggagc
agaccgttttcaagagccaatcagtatttggaacaaatcggggatgagccgattgactgg
tcccttccgaatctttaa
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