Bacillus sp. Y1: DOE78_16415
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Entry
DOE78_16415 CDS
T05922
Symbol
sigF
Name
(GenBank) RNA polymerase sporulation sigma factor SigF
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
bacq
Bacillus sp. Y1
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacq03021
]
DOE78_16415 (sigF)
Transcription machinery [BR:
bacq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DOE78_16415 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_3
HTH_26
Sigma70_ECF
MarR_2
DUF4859
KORA
HTH_28
HTH_37
HTH_24
HTH_31
HTH_Crp_2
GerE
DUF134
Trp_repressor
DUF2963
IF2_N
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AYA76895
UniProt:
A0A385NR63
LinkDB
All DBs
Position
complement(3335687..3336445)
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AA seq
252 aa
AA seq
DB search
MDVEVKTDSKQTYLKDHEVKDLIKRSQDGDQEARDTIVQKNMRLVWSVVQRFLNRGYEPD
DLFQIGCIGLLKSVDKFDLSYDVKFSTYAVPMIIGEIQRFIRDDGSVKVSRSLKEMGNKI
RRAKDELSKNLGRIPTVSEIAEHLNLTPEDIILAQEASRQPSSIHETVYENDGDPITLLD
QIDDGNEGKWFDKIALKEAIRELDERERLIVYLRYYKDQTQSEVAERLGISQVQVSRLEK
KILQQMKDRMDL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggaggtaaagactgatagcaaacaaacgtatttaaaggatcatgaagtgaag
gatctaatcaagagaagtcaagatggagatcaagaagctcgagatacaattgtgcaaaaa
aatatgcgtcttgtttggtcagttgttcaacgctttctcaatcgaggctatgaaccagat
gacttattccaaattggatgcatagggttactgaaatctgttgataaatttgatttatct
tatgatgtaaaattttcaacctacgcagtaccgatgatcattggagaaatccaacgcttc
atccgagatgacggatctgtcaaagtgagccgttccttaaaagaaatgggcaataaaata
agaagagcgaaggacgaactgtccaaaaacctaggcagaataccaactgtttccgaaata
gcggaacatttgaatctgactccagaagatatcattttagctcaagaagcaagtcgtcaa
ccatcttccatccatgaaacagtatacgaaaatgatggagatccgatcaccctgcttgac
caaatcgatgatgggaatgaagggaaatggtttgataaaattgcattaaaagaagcaatt
cgagagctggatgaacgcgagaggctgattgtatatttacgttattataaggatcaaaca
caatcagaggtggcagaacggctaggaatatcgcaagttcaagtatcaagactggaaaaa
aagattttacaacaaatgaaagatcgaatggatttataa
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