Bacillus atrophaeus: BATR1942_19145
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Entry
BATR1942_19145 CDS
T01339
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bae
Bacillus atrophaeus
Pathway
bae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BATR1942_19145 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bae03021
]
BATR1942_19145 (rpoB)
03400 DNA repair and recombination proteins [BR:
bae03400
]
BATR1942_19145 (rpoB)
Enzymes [BR:
bae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BATR1942_19145 (rpoB)
Transcription machinery [BR:
bae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BATR1942_19145 (rpoB)
DNA repair and recombination proteins [BR:
bae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BATR1942_19145 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ADP34746
UniProt:
A0ABM5M3Q1
LinkDB
All DBs
Position
3744788..3748372
Genome browser
AA seq
1194 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGDPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEITDLIGENEYLRNTLDKDNTENSDKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIFAPTDAEGEQT
INVIGNAYIEEAIKNITPADIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRF
GFIETPYRRVDPETGKVTPRIDYLTADEEDNYVVAQANARLDDEGSFVDDSIVARFRGEN
TVVPRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPFVGT
GMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEDVDGQKVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMELGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRIGAEVNDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSGDEEEIEMRDLEDDEDGKQADGLALSNDEEPEEAAAPADVERDVVTKE
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctatgctcgcatt
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagacatatcgccaattgaggatttcactggt
aacctctctcttgagttcattgactacagtttaggagatcctaagtatcctgtagaagaa
tcaaaagaacgtgatgtgacttattcagctccgctaagagtgaaggttcgtttaattaac
aaagaaactggagaggtaaaagaccaagatgtcttcatgggagatttccctattatgaca
gatacaggtacttttatcatcaatggtgcggaacgtgttatcgtatctcagcttgttcgg
tctccaagtgtatatttcagtggtaaagtagacaaaaacggtaaaaaaggttttaccgcg
actgtcattccaaaccgtggcgcatggttagaatacgaaactgatgcgaaagatgttgtt
tatgtccgcattgatcgcacacgtaagttgccggttacggttcttttgcgtgctctcggc
ttcggctctgatcaagagattactgatcttattggagaaaacgagtatttgcgcaatacg
cttgataaagataacactgaaaacagtgataaagcgcttcttgaaatctacgagcgcctc
cgtcctggagaaccgcctacagtagaaaacgcaaaaagcttgcttgattcccgtttcttc
gatccgaaacggtacgatcttgccaatgtaggacgctataaaattaataaaaaacttcat
atcaagaatcgcctgtttaaccaaagacttgcagaaacacttgttgatcctgaaactggt
gaaattcttgcagaaaaaggacagattcttgacagaagaacacttgataaagtgctgcca
tacttagaaaacggaatcggttttagaaaactgtatcctaatggcggcgttgtcgaagat
gaagtgacgcttcaatccattaaaatctttgctcctacggatgccgaaggagaacagacg
attaatgtgatcggcaatgcgtacattgaagaggcgattaaaaacattacgcctgctgat
attatttcttctatcagctacttcttcaacctgcttcacggagtaggcgacacagatgat
atcgatcatcttgggaaccgccgtttacgttctgtcggtgagcttttgcaaaaccaattc
cgtatcggtctaagcagaatggaacgtgtcgttcgtgaaagaatgtcaatccaggatacg
aatactatcactccgcagcagcttatcaatattcgtcctgttatcgcgtctattaaagag
ttctttggaagctctcagctttctcagttcatggatcagacgaacccgcttgctgaatta
acgcacaagcgccgtctgtcagctcttggacctggcggattgacacgtgagcgtgccgga
atggaagtacgtgacgttcactactcccactatggccgtatgtgtccgattgaaacgcct
gagggcccgaacatcggtttgatcaactcattatcatcatatgcgaaagtgaatcgcttt
ggttttattgaaacgccataccgccgtgttgaccctgaaacaggaaaagtaacacctaga
atcgactacttaactgctgatgaagaagataactatgttgtcgctcaagcaaacgcgcga
cttgatgacgagggttctttcgtagatgacagcattgtagcccgtttcagaggagagaac
accgttgttcctagaaaccgtgtggattacatggatgtatcgcctaagcaggttgtatct
gctgcgactgcgtgtatcccgttcttggaaaacgatgactccaaccgtgcattaatggga
gcgaacatgcaacgtcaggctgtgcctcttatgcagccggaagcgccattcgtcggtaca
gggatggaatatgtatccgggaaagactccggtgctgccgtcatctgtaaacaccctgga
atcgttgagcgcgttgaagcgaaaaacgtttgggtgcgccgttatgaagatgtagacggc
caaaaagtaaaaggaaacctggataaatacagcttgctgaaatttgtccgctctaaccaa
ggtacttgctataaccagcgtccgatcgtaagtgtcggcgatgaagtagtaaaaggagaa
atccttgctgacggtccttctatggagttaggtgaacttgcacttggccgcaacgtcatg
gtcggcttcatgacatgggatggctataactatgaggatgccatcatcatgagcgaacgt
cttgtgaaggacgatgtttatacatctattcacattgaagaatatgaatcagaagcacgt
gatacaaaacttggaccggaagaaatcactcgtgatattccgaacgtcggggaagacgcg
ctccgcaatcttgacgaacgcggaatcatccgtatcggtgctgaagtgaatgacggagat
cttcttgtaggtaaagtaacgccaaaaggtgtgactgaacttacagctgaagaacgcctg
cttcatgccatctttggtgaaaaagcacgcgaggtccgtgacacatctcttcgtgtgcct
cacggcggcggcggaatcatccacgatgtgaaggtctttaaccgtgaagacggtgacgaa
cttcctccgggtgtaaatcagctagtacgtgtatatatcgttcagaaacgtaaaatttct
gaaggagataaaatggccggtcgtcacggtaacaaaggtgttatctctaagattcttcca
gaagaagatatgccttaccttcctgacggcacaccgattgatatcatgcttaacccgctt
ggcgtaccatcacgtatgaacatcgggcaagtattggagcttcatatgggaatggcagct
cgttacctaggcattcacattgcttcgccggtatttgacggagcacgtgaagaagacgtg
tgggaaacacttgaagaagccggaatgtccagagacgcgaagactgttctttacgacgga
cgtaccggagagccgtttgacaaccgtgtatctgtcggtatcatgtacatgattaaactg
gctcacatggttgacgataaacttcatgcacgctctacaggtccttactcacttgttacg
caacagcctcttggcggtaaagctcaatttggcggacagcgttttggtgagatggaggtt
tgggcacttgaagcttacggtgctgcttacactcttcaagaaattcttactgttaagtcc
gatgacgtggttggccgagtgaaaacatacgaagccatcgtgaaaggcgataatgttcca
gaaccaggtgttccggaatcattcaaagtattaattaaagaacttcaaagcttgggtatg
gatgttaaaatcctttccggtgatgaagaagagatagaaatgagagatttagaagacgac
gaggatggcaagcaagctgacggtctggctttatcaaatgatgaagagccggaagaagct
gctgcacctgcagacgttgaacgtgatgtagtaacaaaagaatag
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