Bombus affinis (rusty patched bumble bee): 126926500
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Entry
126926500 CDS
T09368
Name
(RefSeq) transient receptor potential protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
126926500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
baff04040
]
126926500
Ion channels [BR:
baff04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126926500
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Ortholog
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
126926500
NCBI-ProteinID:
XP_050598746
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All DBs
Position
18:4702332..4717792
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AA seq
1116 aa
AA seq
DB search
MNPSESQQNLLANEARAPSVQSLNPPSDYSLGPVEKHFLLSAERGDCATVKRLLEENKDH
PEILNINCVDPLNRSALIAAIENENVELIRLLLDLGIQVKDALLHAIKEEYVEAVEILLE
WEEKIHEPGQPYSWEAVDRSSSNFTPDITPLILAAHKNNYEILKILLDRGATLPTPHDAR
CGCDECVTSSEQDSLRHSQARINAYRALTSPSLIALSSRDPLLTAFELSWELRRLSHMEQ
EFRFEYNEMREQTQNFATALLDHARTSLELEVMLNYNPHGENWEPGERQTLDRLKLAIKY
KQKQFVAHPNVQQLLAAIWYDGLPGFRRKSMIGQFIEIGKLGAMFPVYSTIYMLSPTSPM
GLFMKKPFVKFICHSSSYAFFLMLLGMASQRIEYLVIELFGNAWMHEILAGWKRRERGCI
PGFVESGVIIYVISLVIGEMRSLWSDGLLEYISDLWNIVDFVQNMFYVIWLMLRVTAWIV
VQREYWNGLDPWYPRDQWHAFDPMLLSEGAFAAGMIFSFLKLVHIFSVNPHLGPLQISLG
RMIIDIIKFFFIYTLVLFAFGCGMNQLMWYYADLEKQKCYHMKDFPDLPDFDNQEKACSI
WRRFANLFETSQSLFWASFGMVDLMSFDLTGIKSFTRFWALLMFGSYSVINVIVLLNMLI
AMMSNSYQIISERADTEWKFARSHLWMSYFEDGDTVPPPFNMVPTGKTFSRIIKCGKTGR
QTRSLIKKSREKALARHDTVMRLLIRRYVTAEQRKRDEFGITEDDVMEIRQDISTLRYEL
IDILRQNGMRTPTLDKQDAALSGKKGRVMERRLQKDFQIGIVEGIVNAVIQSEKEPKDVF
SQIAKAIGRKSSGSKKKDWNAMVRKNTFVKDPIGSTTEATMKQTRRSIRRHLQTQNSDLA
SLDPNRLVDYNPNLLEVSPTTRIAYAKFMIGRARPVPEQKEEGESKNDVEGSQKSVRIVT
EPVHATPILKKTLLKSLSSGSLEKGGEKAVSIEVRAPSPIPEDPKEGEVGNSPQSKAGLA
KNPTDTKPLPEKEEGDRKNTEDEEKKKREEEEKRKKEMEEEKKKKEEEKKKDEGEKKKES
NSEPSKPAANEDNVPVATTKLRGKSKATGQIMGGWI
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatcagagtcgcagcagaatcttctcgcgaacgaggcgagagcgccatcggtg
caatctttaaacccgccctcggactacagtcttggcccagttgagaagcacttcctgctc
agcgcggaacgaggtgattgtgccactgtcaaaagactattggaagagaacaaggatcat
ccagagatcctcaacatcaactgcgtggatcctcttaaccgatccgctctgatcgccgcc
attgagaacgagaatgttgaactcatcagactacttctcgacttaggcattcaagtgaag
gatgcactcttacacgccataaaagaagagtacgtggaagctgtggagatccttctcgaa
tgggaggaaaaaatacacgagcctggtcaaccttacagttgggaagctgtagacagatca
tcgtcgaactttacaccagatataaccccactgattttggcagcacataagaacaattat
gaaattctaaaaatcctcctagatcgtggtgccacgcttcccactcctcacgatgccaga
tgtggttgcgacgagtgtgtgacatccagcgaacaggattctttgagacattctcaggcg
cgaataaacgcgtatcgcgcgcttacatcaccatctttaatcgccttatcgtcgagagac
cctcttctgaccgctttcgaactctcctgggaacttcgtcgattgagtcatatggaacaa
gaatttcgtttcgaatataatgagatgcgggagcaaacacaaaattttgctacagccctg
ttggatcacgcacgtacctctctggaattggaggtaatgttgaattataatccgcatggc
gaaaattgggaacctggagaaagacaaaccctggatcgactcaagcttgctattaaatac
aaacagaaacagttcgtggctcacccaaatgttcaacaattactggctgctatctggtac
gacggtttgcctggctttcgaagaaaaagtatgatcggacagttcatagagatcgggaag
ctcggcgccatgtttccagtgtacagcacaatctatatgctctcgccaacgtcaccaatg
ggtttgttcatgaagaaacctttcgtcaaattcatctgtcactcctcttcctatgcgttc
ttcttaatgcttctcgggatggcgtcacaacgtatcgagtacctggtaatcgaattattt
gggaacgcctggatgcacgagatactggccggatggaaaagacgggaacgtggctgcatt
cctggtttcgtcgaatccggtgtcatcatctacgtaatcagtctggtaataggcgaaatg
agatcattatggtcggatgggttgctggagtatatatcagacctttggaatatagtggac
ttcgttcagaatatgttttacgtgatttggttaatgttacgagtaaccgcatggattgta
gttcagagggaatactggaatggcctagatccttggtatcccagagatcaatggcacgcc
ttcgaccctatgcttctttctgagggagcctttgcagctggtatgattttcagttttttg
aagctagttcacatattcagcgtgaaccctcacctcgggccacttcaaatttccctgggg
aggatgataatagacattatcaagttcttcttcatttatactctggtgctgttcgccttt
ggctgtggaatgaatcaactaatgtggtattatgcggatttggagaaacaaaagtgttat
catatgaaggattttccggatctacctgattttgataatcaggagaaggcttgttcgatt
tggagacgtttcgccaatttgttcgagacatcgcaatcgcttttttgggccagtttcggt
atggtagatctgatgtcgtttgatctaactggaataaaaagcttcaccagattctgggcg
cttctcatgttcggttcttactccgtcataaacgttatcgtgttactgaacatgcttatt
gccatgatgtctaattcctatcaaatcatctcggaaagagctgacactgaatggaaattc
gccagaagtcacttatggatgagttacttcgaagatggtgacactgtgcctcctccattt
aacatggttccaaccggcaaaacgttcagtaggatcatcaagtgcgggaagaccgggcgg
caaaccagatctttgattaaaaagtctagagaaaaagcgttggcaagacatgacacggtg
atgcgattactcatcagacgttatgtaactgcggaacaaaggaaacgagacgagttcggt
atcaccgaagacgacgtaatggagatcagacaggacatttccacgttacgatacgagctt
attgatatacttcgacaaaacggaatgagaacaccaacgctcgacaaacaggatgccgca
ctatctggcaagaaaggtcgtgtgatggaacgtcgactgcaaaaggacttccagatcggt
atagtagagggcatcgtgaacgccgtgattcagagtgagaaggaacctaaagatgtgttc
agtcaaatcgcgaaggctattggtcgaaagagtagcggaagcaagaagaaagactggaac
gccatggtccggaagaacactttcgtaaaggatcctattggtagcacgaccgaggccact
atgaaacaaacgcgacgcagtatacgtaggcacttacaaactcagaattcggacttggcc
tcgttagatcctaatcgtttggttgattacaatcctaatctattggaagtatcaccgacc
acgaggatcgcctacgcgaaattcatgataggtcgggcaagacctgttccagagcaaaag
gaggagggggaaagtaagaatgatgttgaaggatcgcaaaaatccgttcgaattgtaacc
gagcctgtccatgcaacgccgatcttgaaaaagactctactaaaatctttgagcagtggt
agcttggagaaaggtggagagaaagcagtttcgatagaagtgagggcaccgtctccgatt
cccgaggatccgaaggaaggagaggttggaaattcacctcagagcaaggctggtttagcg
aaaaacccaacagatacaaaaccattgccggaaaaagaggaaggagataggaagaacacc
gaagacgaggagaaaaagaaaagggaagaagaagaaaaaaggaaaaaggaaatggaagaa
gagaagaagaagaaagaggaagaaaagaagaaggatgaaggagaaaagaaaaaggaatcg
aacagcgagccatcaaaacctgcggctaatgaagataatgttccggtagctacgacaaaa
ttgaggggaaaatcgaaggcaactggccagataatgggtggatggatttaa
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