Bombus affinis (rusty patched bumble bee): 126928623
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Entry
126928623 CDS
T09368
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03013
Nucleocytoplasmic transport
baff03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126928623
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126928623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126928623
03110 Chaperones and folding catalysts [BR:
baff03110
]
126928623
04121 Ubiquitin system [BR:
baff04121
]
126928623
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126928623
Chaperones and folding catalysts [BR:
baff03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
126928623
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
126928623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
WH1
Zn_ribbon_RanBP
ANAPC3
TPR_2
TPR_16
TPR_8
TPR_1
DUF7365
ARM_TT21_2nd
TPR_12
TPR_19
Motif
Other DBs
NCBI-GeneID:
126928623
NCBI-ProteinID:
XP_050600202
LinkDB
All DBs
Position
2:complement(16386674..16397799)
Genome browser
AA seq
2876 aa
AA seq
DB search
MRVVWIRPFESDLWYEGKSYCEQPLREILYYILKMFRSKKDVDRHVKNIFIKLKDSGEKK
LRCYNIAKLYYQVGDYESAKKYVSNYLEIRDKSAGAHKLLGQALEALGQKEAAFVRYKIS
LELEPKQDDLLLKVCELLSDMDINTDINKIKYWVERADKKFPHHEIVFELKEKLLTLKTP
SGDDDDLEKLIISELSVKQTDVHLQVKLLKYYVGNHRLEDAYNKATEIEATQCHRNNIIW
YQSLTELLVKCKESKQSDWTFWIFYISVLERYAALCLKEQSNVIRKSITDIIQAVFNFDQ
SLHECKSKNFSNHPVFIEHMLLHMWGQLHFHLACLILRKTKAGEDSWSEAGRLCGPLLLT
ALHVAPIDPTAVWTMHLKDRLKNLVHVWYREGSYRYSQAGHVLQDYARDNTKKLLDKIDK
FCTSSWRERVYQRIFIGRLYQDGKTTSYFVNSSVSNPPLRLCSFNELKRFDEISEEVWPD
SLHHQVWLGLRARPHTSQNKDNGPHPNQTSRVFCELQFSVYNLHQAAPESLSRLDIDAFL
NAAICTSSVLEEQQLSGLLNPEKLPTLPADLTNTLCTSAQEQWWSYAYKVYSMDKQKPLD
EDVGELRLELQRGLEVVRCLGNHGLHPVLLVHLARIFHYRAETLKEIDQENNDIPYLEAR
SEMYWSAAVPLLERLQNNQVIRITNSKFFNYQGKEMNNVEIIKALEEGKLLLAQRFVRSK
QYEKAIDALQALKCPEASVQQGQMYEKLADEIISSIPKESLTSEMRSQHIIMLSKARECF
YLTLDRLRSPGTDPKHPLNLLLSTYISNVENKLKRIDPDLSRGDLSRNECDGMSDESYSS
AHSAVDQTATKISTLTGLNASINILSTPQKNLHRTPKQSSTPCRTQHQDILDLSRNRSEA
RPSPERLDAQIRTLNQMIHAKDNKIQSIAEQNKAILELNKTVMEKVEKLAKEVTELRKEF
QKQRTQINVNVNPNLEEDLCILNEDDYNDLNYNANQSGAASSISGNMFQSSHRHPYSQLV
YPSATFQGYYPAGMSFNDPNAQAIPSLYPPNVYSMPVLYPNTRSKMPENILQQSLFMPPT
SQSLQIPLQKVETSKPESTIKDAPVNKIPPVNVAITTSDTLPTTAPIVQPTLSVTIPPHF
RQSSSSTSVATEQSAPHCYQISMPSQATIPTTVNLPPLSNTVTTTPANLSVSETSKQDTI
CSTGSPNSSDHEHDPIPDFVPVIPLPAEVKVTTGEEGQEVLFCARAKLYRFVDNEWKERG
IGNVKLLKNEEGKVRLLMRREQVLKVCANHYLAPDMELTAKSNNEKAWFWVAHDFADGEL
NLEKFCIRFKTVEEGISFKEHFDKAKASLTSEKIIESIDKTSTKASTTSSNIKKSEKTKS
DLKAIEQTPFVSGQTVQKQSIDVTETITSEKLKTNVPTTVIGGFSFTSTPIIQKTTTTES
SKVPTKSEVSPFAGFTFNKTVTNAESFATTTQKNSTTGIIAASQFTFPFTKATTPSQSGA
TTVPTVSVHNSSISSSQPTSTVVTNENTSVSTSQFSLRRPSAPAPALALAPAPAPATASA
PAPVPAPAPAPAPAPAPAPALAPANSTVPTFASAGIQDIGKSLVQTEYEEMLFTEKISLQ
YYNSDAKQWENRGTGQIKILWNPKTNKIRLLMIDENSLKICYNYDIFAKCPFTLKSSSNT
VVNWNIQYGLDNKTVMFAATFKTSSQASQFYSIITSNQQKMVKDCITAESLKKPETMQNT
QTNKIQTSLSEMFKPPAGSWECNACYTRNAESNAKCIACEEPRSSVSNKSNISNTVTSSQ
IPLSQMFKPPAGSWKCKCCDIVNAAESNYCVACDTPKDLSLPPKPKTDGFQISTSSSGVT
PTFTFGIPQDTTKKSTSGFSFRLSTSNDVSIDSKSTSLIATKSDDKTDTSNAKFVFGTPG
KSFGFNFVSKSSPTKSGEEENSEEEVVESDDIHFSPIIPLPDKIEVKTGEEEEEVLYSHR
AKLFRYDKSVNEWKERGLGDIKLLQHKETGKLRLVMRREQILKLCLNHFVLPNLELKPKD
EKTWMWNAADYSEGEIEPTLFACRFKTSDIANDFKDVIDKSRMELPSIEKTAETKIEAFT
EVSPTRDIEVLYEMKVTPEEKQAALKFQLPENFYAYKQKPDCPGCRGCKEYSDVSLFSDR
NSEKAASTSKTPTEDQKPLTTTSGIQSLSKSINLSPASNEVTTVQTPVSNTDTTVSSIFK
SGLHSTTASQFATNSLSTTTTSSISFGNTNTITSSDKKTGFSFVMPQTTSTTNEIQKSTS
DTLTPENLKICSPTNSQGQVSSTTSFSFMTSSTTPTTSIFGMAKLDNTGKNIFGGMWKKD
SSGLLKPTSINVSTNNSESIFSNNFNTQPKTNTSTAMTSVFGASTSIFGSSALKTSSESS
TTGSSSFDTSAKSTNSIFPNTSTSFSSNLFSGSCTTTSSFTISNPVTTNAFGTLIPTTSE
TQNDSDIAFLPTTNVSFSTLAAQSSQMAFKTDPNFSFVGAGSAVFGSKSKSVQKAKQVIA
DKKDENEEEEYDQTENDQDHDPHFEPIIPLPDIIEVHTGEEEEEKVFCERAKLYRYDKNT
CEWKERGVGEMKILHHPKYDRYRLLLRREQVYKVVCNLLLTPDIVFTKLSTNERSWIWAG
MNHAEEQPCIEQLAVKFKTVELAKKFKDTVDKVQQTLSESREKNVEDRPVIEEPEDGKNE
EVDEEEGDEVEVDVEINEIEDEEEEEDNDDDDDDDDEDDDEDDDENDDEDDDEYDDEDDD
QEEEEEEEDDQNSITFEKSASVFARNKKGGWNFVASGNLIIYYDPNIFGEKIILKADETD
EVVSNTIISMTTNMKVNGTQCIWTAIDHALTPPTKRTLSATFSSVHVAQEMYKHFQ
NT seq
8631 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcgtttggataagaccgtttgaaagcgatttgtggtatgagggaaagtcttat
tgtgaacaaccattaagggaaattttgtactatattctgaaaatgtttcgatcgaagaag
gatgttgaccgacacgtgaagaacatttttatcaaacttaaagactcaggagagaaaaag
cttcgatgttataatattgcaaaattatattatcaagttggagattatgaatctgcaaaa
aaatatgtttcaaattatttggaaataagagataaatctgcaggagctcataaattatta
ggtcaagctcttgaagctttgggccaaaaagaagcagcctttgtaagatataaaatatct
cttgaattagaaccaaagcaggatgatcttctcttaaaagtatgtgagctgttgtctgat
atggatattaatacagatataaataagataaaatattgggtagaaagagcagataagaaa
tttccacatcatgaaatagtttttgagctaaaggaaaaattgttaactttaaaaacacca
agtggtgatgatgatgatttagaaaaacttattatatctgaattatcagtaaaacaaaca
gatgtgcatctacaagtgaaattgctcaagtattatgtaggaaatcataggcttgaagat
gcatataacaaagcaactgagatagaggcaacacagtgtcacagaaataatatcatttgg
tatcagtcattaactgaattacttgtgaagtgtaaagagagtaaacagtcagattggaca
ttttggatattttatatttctgtgttagaaagatacgcagcactttgtcttaaagaacag
agtaatgttattagaaaaagtataacagatattatacaggcagtatttaattttgatcaa
agtttacatgaatgtaaatcaaagaacttctctaatcatcctgtttttattgaacacatg
ttattacacatgtggggtcaattacattttcatttagcatgtttaattttacgtaaaact
aaggctggtgaagatagttggtctgaagcaggtagattgtgtggacctcttttattaact
gcattacatgtagcacctatagatcctactgctgtatggactatgcatttaaaagataga
cttaagaatctagtacatgtttggtatagagaaggatcatacagatatagccaggcaggt
catgtacttcaagattatgctcgagataatactaagaaattactagataaaatcgataaa
ttttgtacaagttcatggcgagaacgggtatatcaaagaatctttattggtcgattgtat
caagatggtaaaacaacatcatatttcgtgaactcttcagtttcaaatccaccattacgt
ttatgttcatttaatgaactaaaaagatttgatgaaatatctgaagaagtatggccagat
tcattacaccatcaagtttggcttggtttaagagctcggccccacacctcacaaaataaa
gataatgggccgcatccaaatcaaacgtcacgtgttttctgtgaattacagttttctgtt
tataacttacaccaagcagctcctgaaagtttaagtcgtctcgatattgatgcattttta
aatgctgctatctgcacttcttctgtacttgaagaacagcaattgagtgggcttttaaac
cctgaaaaattacctacattgcccgcagatcttactaacactctctgtactagtgctcaa
gaacagtggtggtcttatgcttataaagtatattctatggataagcaaaagccattggac
gaagatgttggagaattgagattagaattacaaagaggcttagaagtagtacgttgcctt
ggaaatcacggattgcatcctgttcttttagttcatttagcacgaatatttcattataga
gcagagacattgaaagaaatagatcaagaaaataatgatataccatatttggaggcaaga
tctgagatgtattggtcagctgcagtaccacttctcgaaagattacaaaataatcaagtt
attcgtataactaattctaaattttttaactatcaaggaaaagaaatgaataatgtagaa
ataattaaagctttagaagaaggtaaattgcttctagctcaacgatttgtacgcagcaaa
caatatgaaaaagcaatagatgcactacaggctttgaaatgtccagaagcttcagttcaa
cagggtcaaatgtatgaaaagcttgcagatgagattatcagttctatacccaaggaaagt
ttaacatctgaaatgagatcacaacatataatcatgctctcaaaagcaagagaatgtttt
tatctaacattagatcgcttacgcagcccaggtacagatccgaaacatcctttaaactta
ttactttccacatatatttccaatgttgaaaataaattgaaaaggattgatccagaccta
tcacgaggtgatttaagcagaaatgaatgcgatggaatgtcggatgaaagttattcttcc
gctcatagtgctgttgatcaaacagctacaaaaatatcaacattaacgggattaaatgct
tcaattaatattctgagtacaccacaaaaaaacttacaccgtacaccaaaacagtctagc
actccttgtagaacacaacatcaggatatattggatttatctcggaatcgctctgaggca
cgtccgagtcctgaacgtcttgacgctcaaattcgtacactaaatcaaatgattcatgca
aaggataataagatacaatcgatagcagagcaaaataaagctatattggaattgaacaaa
acagtaatggagaaagtcgaaaaattagcaaaagaagtaacagaattacgaaaagaattt
cagaaacaacgtactcagattaatgttaatgttaatccgaatctagaagaagatttgtgc
attctaaatgaagatgattacaatgatttgaattacaacgcaaatcaatcaggcgccgca
tcttcgatatctgggaacatgtttcaatcttctcatagacatccatattctcagttggta
tatccttcagctacttttcaaggatattatccggcaggaatgtcatttaatgacccaaat
gcacaagctattccttctttataccctccaaatgtttattcaatgccggtattgtatcct
aatacgagatcgaaaatgcctgaaaacattcttcaacaaagcttatttatgccaccaaca
agtcaatcattgcaaattcctctgcaaaaagtagaaacatcaaagccagagtcgactata
aaagacgctcctgtaaataaaattccaccagttaatgttgctattaccacttctgataca
cttccaactacagcaccaattgttcagccaacacttagtgtaacaattcctccacatttc
agacaaagtagttcttctacttcagttgccacagaacaatctgctccacattgttatcaa
atttctatgccttcccaagctactataccaacaacagtaaacttaccgcctttatcaaat
actgttacaactactccagcaaatctttctgtatcagagacatcaaagcaagatactatc
tgttcaactggatctccaaatagttcagatcatgaacatgatccaattccggattttgtt
cctgttataccattacctgcagaagttaaagttactactggagaggagggtcaagaggta
ctgttttgtgcaagagctaaactttaccgtttcgtggataatgaatggaaagaacgtggt
ataggaaacgtcaaattacttaaaaatgaagaaggaaaagttcgtttacttatgcgcagg
gaacaagtattaaaagtatgtgcaaatcattatcttgcgccagatatggagttaactgct
aaatcaaataatgaaaaggcatggttttgggttgcacatgactttgctgatggagaatta
aatctagaaaagttttgtatcagatttaagactgttgaagaaggtatttcctttaaggaa
cattttgataaagctaaagcaagtcttacatctgagaaaataattgaaagtattgataaa
acatcaaccaaagctagtactacatcgagtaatattaaaaagtcggagaaaactaaatca
gatttaaaagctatagaacaaacaccatttgtttctggacaaactgttcaaaaacaatct
attgatgtgacagaaaccattacatcagagaaattaaaaactaatgtacctacaacagtt
attggtggattttcatttacatcaacaccaattattcaaaaaacaaccactacagaatct
tcaaaagttcctactaagtcagaagttagtccatttgccggttttacatttaataagact
gtaacaaatgctgaaagttttgcaactacaacacaaaaaaactcgactactggaataata
gctgcatcacagtttactttcccatttacaaaagcaactacaccttctcaatcaggggct
acaacagtaccaactgttagtgttcataactcgtcaatttcatcttcacaaccaaccagt
actgttgttactaatgaaaatacttctgttagtacttctcaattttcacttagaagacct
tctgctcctgctcctgctcttgctcttgctcctgctcctgctcctgctactgcttctgct
cctgctcctgttcctgctcctgctcctgctcctgctcctgctcctgctcctgctcctgct
cttgctcctgcaaattctactgttccaacctttgcttctgcgggtattcaagatataggc
aagtctcttgtacaaactgaatatgaagaaatgctattcactgaaaagattagccttcag
tattacaacagtgatgccaaacaatgggaaaacagaggtactggacaaataaagatttta
tggaatccaaaaacgaacaaaattcgtttattaatgatagatgaaaatagtttgaaaatt
tgttataattatgatatttttgcaaaatgcccatttacactaaaaagtagtagtaacaca
gttgtcaattggaacatacaatatggattagacaacaaaacagtaatgtttgcagcaaca
tttaaaacatccagtcaagcatctcaattctatagcataattactagcaatcagcaaaag
atggtaaaggattgtattacagcagaaagtttgaaaaagccagaaactatgcaaaataca
caaacaaacaaaatacagacttccttgtctgaaatgtttaagccaccagcaggatcatgg
gaatgtaatgcttgctatacaagaaatgcagaatcaaacgcaaaatgtatagcttgtgaa
gaaccacgttcttctgtgtcgaataaatcaaatatctcaaatacagttacatcaagtcaa
atacctctttcacaaatgtttaaaccacctgctggctcatggaaatgtaaatgttgcgat
attgttaatgcagctgaaagtaattattgtgttgcctgtgacacaccaaaagatctgtct
cttccacctaaaccaaaaactgatggttttcagataagtacaagttcctctggagttaca
cccacatttacgtttggtattccacaagatactactaagaaaagtacaagtggattttca
tttcgtttatctacctctaatgatgtttctatagattctaaatctacgtcattgatagct
acaaaatctgatgataaaacagatacatcaaatgcaaaatttgtttttggaacaccagga
aaatcgtttgggttcaattttgtgtctaaatcatctccaacaaagtctggtgaagaagaa
aatagcgaagaggaagtggtggaaagcgatgacatacatttttcaccaataattccatta
ccagataaaattgaagttaaaacaggtgaagaagaagaagaagttctttatagtcataga
gcgaagttgtttagatacgataaatcggtaaatgaatggaaagaacgtggtttaggtgac
ataaaattattacaacacaaggaaacgggcaaattgcgattagtaatgagacgagaacaa
atattaaagctgtgtttaaatcatttcgtgcttccaaatttggaattgaagccgaaagat
gagaaaacatggatgtggaatgctgctgattatagcgaaggagaaatcgaacccactctc
tttgcgtgtcgctttaaaacatccgacattgctaacgatttcaaagatgtaattgacaaa
tcaaggatggagctcccatccattgaaaaaactgctgaaacgaaaatagaagcatttacc
gaagtttcacctacacgagatatcgaggttctgtacgagatgaaagtaacacctgaagaa
aaacaagctgcattaaagtttcaacttccagaaaacttctatgcgtacaaacaaaagcca
gattgtcctggatgtagaggctgtaaagaatattcggatgtatcgttattttcagacaga
aattctgaaaaagcagcatctacatcaaaaacacctacagaggatcaaaaacctctaact
actacatctgggatacagtcactttcaaaatctattaatttaagtcccgcatctaatgaa
gtcacaactgttcaaacaccagtttcaaatactgatacaactgtttcttccattttcaag
tctggattgcatagtacaaccgcgtcacaatttgcaacgaattctctctctacaacaact
acatcaagtatatcatttgggaatactaatacgatcacatcaagtgataagaaaactggt
ttttcatttgtaatgccccaaactacatctactacaaatgagatacaaaaatctacatct
gatactttaacacctgaaaatttaaaaatctgtagtcccactaattctcaaggacaggta
tcatcgactacatctttttcatttatgacatcgtctacaacacctacaacatccatattt
ggaatggcaaaattagataatacaggaaagaatatttttggtggaatgtggaaaaaagat
tcttctggattacttaagcctacttccattaatgtcagtacaaataattctgaatcaata
ttttcaaataattttaacactcaaccaaaaacaaatacaagtactgcaatgacatctgta
tttggtgctagtacttctattttcggatcttctgcattgaaaactagttctgaaagctca
accacaggttcatcatcatttgatacatctgctaaatctactaattcaatatttcctaat
acatctacatcattttcgtccaatttattctccggctcatgtacaactacatcatctttt
acaatttcaaatcctgtgacaactaatgcttttggaacattaataccaacaacaagcgaa
acgcaaaacgacagtgatattgctttcttaccaacgacaaatgtgtcattttcaacttta
gcagctcaaagttcccagatggcattcaaaacagatccaaatttttcttttgttggtgct
gggtcagctgtatttggttcaaaatcaaaatctgtgcaaaaagcaaaacaagttatagca
gataaaaaagatgaaaatgaagaagaagaatatgatcaaaccgaaaatgatcaagatcat
gatcctcatttcgagcctattatacctctgcctgatattatagaagtacataccggagaa
gaagaggaagagaaagtattttgtgaaagagctaaattatacagatatgataagaacacg
tgcgagtggaaagaaaggggtgttggagaaatgaaaattttacatcatccaaagtatgac
cgttacagattgctgttacgacgagaacaagtttacaaagtagtatgcaatctcttactt
actccagacattgtctttactaaactcagtacgaatgagcgctcttggatatgggcaggc
atgaatcatgctgaagaacaaccatgtatagagcaattagcagttaaatttaaaactgta
gaactggcaaaaaaattcaaggatacagttgataaagtccaacaaactttaagcgaaagc
cgagaaaaaaatgtagaagatagaccagtaatagaagaaccagaagatggtaaaaatgaa
gaagtagatgaagaagaaggtgatgaagtcgaagtagacgttgaaataaatgaaatagag
gatgaagaagaagaggaagataatgatgatgatgatgatgatgatgatgaggatgatgat
gaggatgatgatgagaatgatgatgaggatgatgatgagtatgatgatgaggatgatgat
caggaggaggaagaggaggaggaggatgatcagaactctattacttttgaaaaaagtgct
tctgtgtttgctagaaataaaaaaggtggttggaactttgttgcatcaggaaatttaatt
atttattatgatcctaatatttttggtgaaaaaataatattaaaggcagatgagacagat
gaagttgtaagcaacacaattattagtatgacaacaaacatgaaggtgaatggaacacaa
tgcatttggacggcaattgatcatgccttgacaccgccgacaaaacgcactttaagtgcc
actttttcctcggtacatgtcgcacaggaaatgtataaacactttcaatga
DBGET
integrated database retrieval system
