Bombus affinis (rusty patched bumble bee): 126928755
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Entry
126928755 CDS
T09368
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126928755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126928755
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
126928755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_14
TPR_1
TPR_2
TPR_19
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_12
TPR_6
ARM_TT21_C
ChAPs
HAT_Syf1_CNRKL1_C
TPR_15
BTAD
ANAPC3
DUF7017
PknG_TPR
TPR_21
Motif
Other DBs
NCBI-GeneID:
126928755
NCBI-ProteinID:
XP_050600410
LinkDB
All DBs
Position
2:complement(1873424..1894134)
Genome browser
AA seq
1301 aa
AA seq
DB search
MSNEIKKALKAARDTFKEKKYVDVIKKCNKILMKDQNNYNALMLLAAAMKEIDEYNPQVP
LILQKGIKIQADNPLAWYGLVSYYEKKLDDNECYNQLLLAYCKLLEIESDSKFTNIMSRI
SKLFTQLKDVATITQCIEHLIELRKNLDDNKIKVIDKTLGWLLLDNFCNLNKYQNLLESI
FKSTINDIDATDQQNFYTKYLKILYDKDELVDLVKEAINMHQRFPQDIIPLEYICLAYSE
RNILDENFTDVGITQFYEGCLKLNKECEAAKIAKVLDLAKSGNLIIARDILKDILVSTPR
SVRGWMALSQINMKLYCWEDAEVAAKRVLDMKKYKIKNKLLYKMKETLVEAMSLTNDKSK
WETAFRMCEQIHPSARLDLIRVHLSILLHQPDVEILLNNLESKDETRTHTNILRALYLKQ
NKQYDEAVNILDSAVRKSGLAQTSQAWLLLGTIYWEMAEYNYSLMAFLNGIKADRFNWKC
LVYLGQYYRDYGNDMERSRRCYQTALQINPNSEEAGIGLSTAYRLLKNRDANIKLLQMLT
AQDSGPRWAWLQLGLQYLDQGNAEQAIKAFQYVIRADPSDSHCWESLADAYFIRGAHTSA
LKSYQRVLELCPKLLYPMIQLAYIKLIIGQYNEAKKDFEQILINKSCYIPALKGLAETCL
ALAKDYTAKQLLGRVNDYLQQAMDSLTVAIKERKDISCLWKLLGDVCYRVAMLPDKYSHL
KVSSILIKYENVEHIVLLKRIDMFSLSARCYCCALSLSPESVFLWYDLALCYLMQLQHDP
SINHKDHASKCLAAAKHAVKLCPSTWKHWNLLGIICMSPYVKNYALAQHAFVMAIDKELN
NAIVWSNLGTLYLYIGSLYKANEAYSRAQRADPSYINSWIGQALIAEMMNRKETADLFRH
ARQLGYHSQAAIGYTHWVLDMILGPNTKHDILYIDTTQSMHAISSAADVMTWYVENHPND
CYARNAYGLLLERQRLYKSAAEQFAVAVCNSTKNEKDLVSINLTRVLIRLKRYNEAIKIC
QGVANINYNSQCNLALALFKAQLYEEAYNTYEKTLHSFANTEAQKSYTLCAMAAIAYSFH
RVNDAKTLLFQCIQIQPPDIMGLLAAASLGILHGDINLAVLVLKELEFYVPHPEYGHHVL
RLFAYYHLIGDNVQNAITILSKEIFRCPGNVKYWTILLRILLETDLQLFSRCAQKVLFLN
RNIITENHAHVACALSFSCFMQNMGPASIRSLQKLLFTYPASIESWAMFIAGFLSRRTMK
KCKMNVEWFLTFISNIQQSYQPTYFMAKWLNDTKIKLKQLN
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgaaataaaaaaagctcttaaagcggctcgtgatacatttaaagaaaagaag
tatgtagatgtgattaagaaatgtaacaagatattaatgaaagatcaaaataattataac
gcacttatgttattggcggccgcaatgaaagaaattgatgagtataatccacaagtacca
ttaattctccaaaaaggtataaaaatccaagcagacaatccattagcttggtacggttta
gtatcttactatgaaaagaagttggacgataatgaatgttataaccaactattattagct
tactgtaagcttttggaaatagaaagtgactctaaatttacaaatattatgagtagaatc
tcaaaactttttacacaacttaaggatgttgcgactataacacaatgtattgaacattta
attgaattacggaagaatttggatgataacaaaattaaggtcattgataaaacgcttgga
tggctgctattagataatttttgcaatctaaacaaatatcaaaatttgttagaaagtatt
tttaaatctacaattaatgatattgatgcaactgaccaacaaaatttttatacaaaatat
ttaaaaattttatatgacaaagatgaattagttgatttggtaaaagaagctatcaatatg
catcagcgattcccacaagatataataccgttagaatatatatgtcttgcttactcggaa
cgaaatatcttggatgaaaattttactgacgtcggtataacacaattttatgaaggttgc
ttaaaattgaacaaagagtgtgaagcagctaaaattgccaaagtacttgatttagcaaaa
tcgggcaatttgattatagcgcgagatatattgaaagatatacttgtatcaacgccgcgc
tcagtacgtggttggatggcattaagtcaaataaatatgaagctttactgttgggaagat
gccgaagttgctgccaagcgagtattagatatgaagaaatataaaataaaaaataaatta
ttatataaaatgaaagagacgttagttgaagcaatgagtttaaccaatgacaaatctaaa
tgggaaactgcattccgaatgtgtgaacaaatacatccttcagcgcgattggatttgatt
cgtgtacatcttagcatattgttacatcagccagatgtagagattctgctgaacaatttg
gaatcaaaagatgaaaccagaacacatactaatattcttcgagcgttatatttaaaacaa
aataaacaatacgacgaagctgtgaatatacttgattcagccgtccgaaagtcaggcttg
gctcaaacttcccaagcgtggttacttcttggtacaatctattgggaaatggcagagtat
aattacagcttgatggcttttctgaatggaataaaagccgatcgttttaattggaaatgt
ctagtttatttgggacagtactatcgtgactatggtaatgacatggaacgttctaggagg
tgttaccaaaccgcattacaaattaatccaaattctgaagaagctggtattggattaagt
acggcgtatagacttcttaaaaatcgagatgcaaatataaaattgttacaaatgttaact
gctcaagatagcggtcctagatgggcgtggttacaactcggtttgcaataccttgatcaa
ggaaatgcggagcaggctattaaagcgtttcaatatgttattagagctgatcccagtgat
agccactgttgggaatcgctagcggatgcgtattttataagaggtgcccacacatcagca
ttaaaatcttatcagcgagtattagagttatgcccaaaattattatatccaatgatacaa
ttagcatatataaaattgattattggacagtataacgaagcaaagaaagactttgaacaa
atattgataaataaatcatgttatattcctgctttaaaaggattggctgaaacctgtttg
gctttagcaaaagactataccgctaaacaacttctgggtcgtgtgaatgactatttgcaa
caagcaatggatagtttaactgtagctattaaagagcgtaaggatatatcttgtctctgg
aagttacttggcgatgtgtgttacagagttgcaatgttaccagacaaatacagtcattta
aaagtatcatctattctaataaaatatgagaatgtcgaacatattgtattgcttaaacgg
atagatatgttctcattatctgcaagatgttattgttgtgcattatctctttctccggaa
tcagtatttctgtggtatgatttagctttatgctatttaatgcaattacagcatgatcca
tcgatcaatcataaagatcatgctagtaagtgtctagctgctgcaaaacatgctgttaaa
ctatgtccttcaacatggaaacattggaatcttctgggtattatttgtatgtcaccgtac
gtaaagaactatgcattggcacaacatgctttcgtaatggcgattgataaggaattaaat
aatgctatagtatggtctaatttgggaactttatatctatatataggaagtttatataaa
gcaaacgaggcttattctcgagctcagcgtgcagatccgtcatatataaatagttggatt
gggcaagctttaattgcagaaatgatgaatcgaaaagaaacagcagatctatttagacat
gcaagacaattaggatatcatagtcaagctgccataggatacactcattgggtacttgat
atgattttaggtcctaacaccaaacatgacattttatatatagatacaacacaaagtatg
catgcaatatcttctgctgcggatgttatgacgtggtatgtagagaatcatccaaatgat
tgttacgctcgaaatgcatatggattattattagaaagacagagactttataaatcagct
gcagaacaatttgctgtagctgtatgcaatagtaccaaaaacgaaaaagaccttgtttct
ataaatttaacacgtgtattaatacgactgaaaagatacaacgaagcaataaaaatatgt
caaggagttgcaaatatcaactataactctcaatgtaatctcgcgttagcgttattcaaa
gctcagctatatgaagaggcgtataatacatatgaaaaaactctgcattctttcgcgaat
actgaagcacagaaatcatatacactgtgtgcgatggctgcgatagcatattctttccac
agagtaaatgatgcaaaaactttactttttcaatgcatacaaatacagcctccagatata
atgggtcttttagcagccgcatcattagggatattacatggcgatatcaatttagctgta
ttagtactaaaagaattggagttttatgtacctcatcctgaatatggtcatcatgttcta
agattatttgcatattatcatttgattggagataatgttcaaaatgccattactattctt
tctaaagaaatctttagatgtcctggtaatgtaaaatattggactatattactcaggata
ttattagaaactgacttacaactgtttagtagatgtgcacaaaaagtattgtttcttaat
agaaatattattactgaaaaccatgcacatgttgcatgtgctttatcctttagctgtttc
atgcaaaatatgggaccagcaagtattagatctctgcaaaagcttctatttacttatccc
gctagcattgaaagttgggcaatgttcattgcaggatttttatcaaggcgtacaatgaaa
aaatgtaaaatgaacgtcgagtggttcttaacatttataagtaacattcaacagtcgtat
cagcctacatatttcatggcaaaatggttaaatgacactaaaataaaattgaaacagctc
aattaa
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