Burkholderia ambifaria AMMD: Bamb_0293
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Entry
Bamb_0293 CDS
T00398
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bamb_0293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bam03021
]
Bamb_0293
03400 DNA repair and recombination proteins [BR:
bam03400
]
Bamb_0293
Enzymes [BR:
bam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bamb_0293
Transcription machinery [BR:
bam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bamb_0293
DNA repair and recombination proteins [BR:
bam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bamb_0293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
WHD_CHMP7
Motif
Other DBs
NCBI-ProteinID:
ABI85853
UniProt:
Q0BJ20
LinkDB
All DBs
Position
1:332212..333189
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGENHARVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPNHVIAHLSKGGKLDVQIKIEKGRGYVPGNVRRYGEDTAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETSGVITPEEAIRQSARILVDQLSVFAALEGTETAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgctgaaacccaagatcatcgccgtggaatcgcttggcgagaaccac
gcgagggtggtcatggaaccgttcgaacgcggttacggccacaccttgggcaatgcgctt
cgccgcgtgctgctgtcgtcgatggttggctacgcgccgaccgaagtcacgatcgcgggc
gtggtgcacgagtactcgacgcttgatggcgtgcaagaggacgtcgtcaacctgctgctg
aacctgaagggtgtggtgttcaagctgcacaaccgtgacgaagtgacggttaccctgcgc
aaggaaggcgaaggcgtcgtgacggccggcgatatcgagctggcgcacgattgcgaagtc
atcaacccgaatcacgtgatcgcacacctgtcgaagggcggcaagctcgacgttcagatc
aagatcgaaaagggtcgcggctacgtgcccggcaacgtccgtcgctacggcgaagacacg
gccaagatcatcggccgcatcgtcctcgacgcatcgttctcgccggttcgccgcgtgagc
tatgccgttgaaagcgcacgtgtcgagcagcgtaccgacctcgacaagctcgtgatgaac
atcgagacgagcggcgtgatcaccccggaagaggcgatccgtcaatcggcccgcatcctg
gtcgaccagctgtccgtgttcgcggcactggaaggcacggaaacggctgccgaagcaccg
tcgcgcgcgccgcagatcgatccgatcctgctgcgtccggtggatgatctcgaattgacg
gttcgttcggcgaactgtctgaaggccgagaacatctactacatcggcgacctgatccag
cgcacggaaaacgagctgctgaagacgccgaacctcggtcgcaagtcgctcaacgagatc
aaggaagtgctcgcttcgcgcggtctcacgctgggcatgaagctcgaaaactggccgccg
gctggtctcgacaagtaa
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