Bacillus velezensis UCMB5033: RBAU_1297
Help
Entry
RBAU_1297 CDS
T02795
Symbol
ykoV
Name
(GenBank) ATP-dependent DNA ligase subunit
KO
K10979
DNA end-binding protein Ku
Organism
bama
Bacillus velezensis UCMB5033
Pathway
bama03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bama00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RBAU_1297 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bama03400
]
RBAU_1297 (ykoV)
DNA repair and recombination proteins [BR:
bama03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RBAU_1297 (ykoV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6058
Motif
Other DBs
NCBI-ProteinID:
CDG29265
LinkDB
All DBs
Position
complement(1321352..1322233)
Genome browser
AA seq
293 aa
AA seq
DB search
MHTMWKGSISFGLVNIPVKLFAATEDKDIKFRSLHKEDHAPIKYEKICTGCEKSLEPDEI
VKGYQYVKGKYVIMTDEDLKDIKQEHEEKAVEIVDFVQLQEIDPIYFNRSYYVGPGDNGT
KAYTLLREALRTTGKIGIASITIRSKQQLAILRVYDNCIVMESIHYPDEVRNAGHVPGVP
EQTAVNEKELQTAITLINELTTEFDPEQYEDTYRKALLAKINDKLEHEEAGVTPAAAGPR
EDVIDLVSALQASIDRTKRPDREQAAPARPKDAASAGGGGKKQKTTRQKAGTS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatgtggaagggttcgatcagtttcggcctcgtcaatatcccggtcaagctc
tttgcggccactgaagataaagatataaaattccgcagtcttcataaagaagaccatgcg
ccgattaaatacgaaaaaatctgcaccggatgtgaaaaaagtctggagcctgatgaaatc
gtgaaaggctatcagtatgtaaaagggaaatacgtcattatgacagacgaagacttgaaa
gacataaaacaggaacatgaagaaaaagcggttgagattgttgactttgtccagctgcag
gaaattgatccgatttattttaaccggtcatattatgtcgggccgggagataacggcaca
aaagcctatacacttctgcgggaagcgctgaggacgacgggtaaaatcgggattgcctcc
attacgatccgctctaaacagcagcttgcgattcttcgcgtgtatgacaactgcatcgtg
atggaatccattcattatccggatgaagtcagaaatgccggacatgtgccgggcgttccc
gagcagacagccgttaatgaaaaagagctgcagacggcgattacgttaattaatgagctg
acaaccgagtttgacccggaacaatacgaagacacataccggaaagcccttctcgctaaa
attaacgataagctcgaacatgaagaagcgggcgtgacaccggctgctgccggcccgcgc
gaagatgtcattgatcttgtcagcgcgcttcaggcaagcattgaccggacgaagcggccg
gatcgcgaacaggctgcaccggcgcggccaaaagacgccgcgtcagcaggcggcggaggc
aaaaagcagaagacgaccagacaaaaagccggaacgtcttaa
DBGET
integrated database retrieval system
