Bacillus amyloliquefaciens IT-45: KSO_012780
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Entry
KSO_012780 CDS
T02462
Name
(GenBank) DNA end-binding protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
bami
Bacillus amyloliquefaciens IT-45
Pathway
bami03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KSO_012780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bami03400
]
KSO_012780
DNA repair and recombination proteins [BR:
bami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KSO_012780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6058
Motif
Other DBs
NCBI-ProteinID:
AGF28045
LinkDB
All DBs
Position
2613668..2614549
Genome browser
AA seq
293 aa
AA seq
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MHTMWKGSISFGLVNIPVKLFAATEDKDIKFRSLHKEDHAPIKYEKICTGCEKSLEPDEI
VKGYEYVKGKYVIMTDEDLKDVKQEHEEKAVEIVDFVQLQEIDPIYFNRSYYVGPGDNGT
KAYTLLREALRTTGKIGIASITLRSKQQLAILRVYDNCIVMESIHYPDEVRNAGHVPGVP
EQTAVNEKELQTAITLINELTTEFDPEQYEDTYRKALLAKINDKLEHEEAGVTPAPAGPR
EDVIDLVSALQASIDRTKRPNREQAAPARTKDTASAGGGGKKQKTTRQKAGTS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatgtggaagggttcgatcagtttcggcctcgtcaatatcccggtcaagctc
tttgcggccactgaagataaagatataaaattccgcagtcttcataaagaagaccatgcg
ccgattaaatacgaaaaaatctgcaccggatgtgaaaagagtctggagcctgatgaaatc
gtgaaaggctatgagtatgtaaaagggaaatacgtcattatgacagacgaagacttgaaa
gacgtaaaacaggaacatgaagaaaaagcggttgagattgttgactttgtccagctgcag
gaaatcgatccgatttattttaaccggtcatattatgtcggtccgggagataacggcaca
aaagcctatacacttctgcgggaagcgctgaggacgacgggtaaaatcgggattgcctcc
attacgctccgctctaaacagcagcttgcgattcttcgcgtgtatgacaactgcatcgtg
atggaatccattcattatccggatgaggtcagaaatgccggacatgtgccgggcgttcct
gagcagacagccgttaatgaaaaagagctgcagacggcgatcacattaattaatgagctg
acaaccgagtttgacccggaacaatacgaagacacataccggaaagcccttctcgccaaa
attaacgataagctcgaacatgaagaagcgggcgtgacacctgctcctgccggcccgcga
gaagatgtcattgatcttgtcagcgcgcttcaggcaagcattgaccggacgaagcggccg
aatcgcgaacaggctgcaccggcacggacaaaagacacagcgtcagctggcggcggaggc
aaaaagcagaagacgaccagacaaaaagccggaacgtcttaa
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