Bacillus velezensis UCMB5036: BAM5036_3699
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Entry
BAM5036_3699 CDS
T02480
Symbol
ydfD
Name
(GenBank) putative PLP-dependent transcriptional regulator
KO
K18907
GntR family transcriptional regulator, regulator for abcA and norABC
Organism
baml
Bacillus velezensis UCMB5036
Module
baml_M00700
Multidrug resistance, efflux pump AbcA
Brite
KEGG Orthology (KO) [BR:
baml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baml03000
]
BAM5036_3699 (ydfD)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
baml01504
]
BAM5036_3699 (ydfD)
Transcription factors [BR:
baml03000
]
Prokaryotic type
Helix-turn-helix
GntR family
BAM5036_3699 (ydfD)
Antimicrobial resistance genes [BR:
baml01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
BAM5036_3699 (ydfD)
Multidrug resistance, efflux pump NorB [MD:
M00702
]
BAM5036_3699 (ydfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
HTH_36
HTH_Crp_2
HTH_11
MarR_2
HTH_41
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
CCP23701
LinkDB
All DBs
Position
complement(3879312..3880760)
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AA seq
482 aa
AA seq
DB search
MSAPEEKKMKKLPKYIQIIQFIKEKIGNGEWPIGSKIPSQRTLAKHFEVNRSTVITALEE
LTADGLIEGRMGKGTVVTNNTWTLLAKNSAPDWDQYVTSGIQQPSQKIVQEINKSESNSD
LIQLSKGELSHEIFPLAVMKEIMGKLSQNIEAFGYEEPKGYLPLREALSGYLRTIGIQAS
PSSILIVSGALQALQLISMGLLQRGSTVFLDQPSYLYSLHVFQSAGMKLTGVPMDNDGLL
PEHIHMARGERGRAILYTNPCFHNPTGILMTKKRREEILAASENAQLPIIEDDIYRELWI
DEIPPDPIKTIDKNGHVLYIGSLSKTLSPGLRIGWIVGPEPVIERLSDIKMQTDYGSSSL
SQRVAAEWFTSGEYQQHLEQVRSQLKVRRQLIMSLLETNLKNVAAWNMPKGGFFVWVKIL
PPLSMKLLYTKALTKGILLNLGSIYAQEKGNYIRLSYAYASLEDLQKGIYELGLMIKELA
SR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccagaagaaaaaaagatgaaaaagcttcctaagtacatacaaatcattcaa
tttataaaagagaaaataggaaatggagaatggccgattggaagtaagattccaagccag
cgcacgcttgctaaacactttgaggtgaacaggagcacagtcattacagctttagaggaa
ttgacggcggatggattaatcgaaggcagaatgggtaaagggacagttgttacgaacaat
acatggacacttttggctaagaattccgcccccgattgggatcagtatgtaacctccgga
atccagcagccaagccaaaaaatcgttcaagagatcaataaatcagaatcgaattctgat
cttatacagctcagtaaaggagaactttcacatgagatttttcctttagctgttatgaaa
gagatcatgggaaagttatctcaaaacatagaggcattcgggtatgaggaaccaaaagga
tatttacctttgagagaggcattaagcggctatttaagaacaatcggcattcaagcgtct
ccttcttccattcttattgtttcgggcgcactgcaagccttgcagcttatatcaatgggg
ctgttacaaaggggatcgaccgtatttctcgatcagccttcctatctttattcattacac
gtatttcaatcagccggtatgaagctgactggagttcctatggataacgatgggcttttg
ccggaacatatccacatggcaaggggggagcgggggagggctatcttatatacaaatcct
tgttttcataatccgacaggtattttaatgacaaaaaagagacgggaagaaatccttgcg
gcaagtgagaatgcacagcttcccattattgaagatgacatttatcgtgagttatggata
gatgagattcctccagatcctattaaaacaatagataaaaatgggcatgtgctttacata
ggcagtttatcgaaaacgttaagtccgggcttgaggattggatggattgtcgggccggaa
ccagtgattgaacgtttatccgacataaaaatgcaaacagattacggctccagttcgtta
tcccagagagtagcggcagagtggtttacatccggtgaataccagcaacatctagaacag
gtgagaagtcaattaaaggtgagaaggcaattgatcatgagtctcttagaaaccaatttg
aagaatgtcgctgcatggaatatgccgaagggaggattctttgtctgggtaaaaatattg
cctccactgtctatgaaattactttatacaaaagctttgacaaaagggatacttctcaat
ctcggcagtatctatgctcaagaaaaagggaattatattcgcttatcatatgcttatgca
tctcttgaagatcttcaaaagggaatttatgaattgggtttgatgattaaggaattggca
agcagataa
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