KEGG   Bacillus velezensis UCMB5036: BAM5036_3699
Entry
BAM5036_3699      CDS       T02480                                 
Symbol
ydfD
Name
(GenBank) putative PLP-dependent transcriptional regulator
  KO
K18907  GntR family transcriptional regulator, regulator for abcA and norABC
Organism
baml  Bacillus velezensis UCMB5036
Module
baml_M00700  Multidrug resistance, efflux pump AbcA
Brite
KEGG Orthology (KO) [BR:baml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:baml03000]
    BAM5036_3699 (ydfD)
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:baml01504]
    BAM5036_3699 (ydfD)
Transcription factors [BR:baml03000]
 Prokaryotic type
  Helix-turn-helix
   GntR family
    BAM5036_3699 (ydfD)
Antimicrobial resistance genes [BR:baml01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AbcA [MD:M00700]
    BAM5036_3699 (ydfD)
   Multidrug resistance, efflux pump NorB [MD:M00702]
    BAM5036_3699 (ydfD)
SSDB
Motif
Pfam: Aminotran_1_2 GntR Asp_aminotransf HTH_36 HTH_Crp_2 HTH_11 MarR_2 HTH_41 HTH_24 MarR
Other DBs
NCBI-ProteinID: CCP23701
LinkDB
Position
complement(3879312..3880760)
AA seq 482 aa
MSAPEEKKMKKLPKYIQIIQFIKEKIGNGEWPIGSKIPSQRTLAKHFEVNRSTVITALEE
LTADGLIEGRMGKGTVVTNNTWTLLAKNSAPDWDQYVTSGIQQPSQKIVQEINKSESNSD
LIQLSKGELSHEIFPLAVMKEIMGKLSQNIEAFGYEEPKGYLPLREALSGYLRTIGIQAS
PSSILIVSGALQALQLISMGLLQRGSTVFLDQPSYLYSLHVFQSAGMKLTGVPMDNDGLL
PEHIHMARGERGRAILYTNPCFHNPTGILMTKKRREEILAASENAQLPIIEDDIYRELWI
DEIPPDPIKTIDKNGHVLYIGSLSKTLSPGLRIGWIVGPEPVIERLSDIKMQTDYGSSSL
SQRVAAEWFTSGEYQQHLEQVRSQLKVRRQLIMSLLETNLKNVAAWNMPKGGFFVWVKIL
PPLSMKLLYTKALTKGILLNLGSIYAQEKGNYIRLSYAYASLEDLQKGIYELGLMIKELA
SR
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgagcgctccagaagaaaaaaagatgaaaaagcttcctaagtacatacaaatcattcaa
tttataaaagagaaaataggaaatggagaatggccgattggaagtaagattccaagccag
cgcacgcttgctaaacactttgaggtgaacaggagcacagtcattacagctttagaggaa
ttgacggcggatggattaatcgaaggcagaatgggtaaagggacagttgttacgaacaat
acatggacacttttggctaagaattccgcccccgattgggatcagtatgtaacctccgga
atccagcagccaagccaaaaaatcgttcaagagatcaataaatcagaatcgaattctgat
cttatacagctcagtaaaggagaactttcacatgagatttttcctttagctgttatgaaa
gagatcatgggaaagttatctcaaaacatagaggcattcgggtatgaggaaccaaaagga
tatttacctttgagagaggcattaagcggctatttaagaacaatcggcattcaagcgtct
ccttcttccattcttattgtttcgggcgcactgcaagccttgcagcttatatcaatgggg
ctgttacaaaggggatcgaccgtatttctcgatcagccttcctatctttattcattacac
gtatttcaatcagccggtatgaagctgactggagttcctatggataacgatgggcttttg
ccggaacatatccacatggcaaggggggagcgggggagggctatcttatatacaaatcct
tgttttcataatccgacaggtattttaatgacaaaaaagagacgggaagaaatccttgcg
gcaagtgagaatgcacagcttcccattattgaagatgacatttatcgtgagttatggata
gatgagattcctccagatcctattaaaacaatagataaaaatgggcatgtgctttacata
ggcagtttatcgaaaacgttaagtccgggcttgaggattggatggattgtcgggccggaa
ccagtgattgaacgtttatccgacataaaaatgcaaacagattacggctccagttcgtta
tcccagagagtagcggcagagtggtttacatccggtgaataccagcaacatctagaacag
gtgagaagtcaattaaaggtgagaaggcaattgatcatgagtctcttagaaaccaatttg
aagaatgtcgctgcatggaatatgccgaagggaggattctttgtctgggtaaaaatattg
cctccactgtctatgaaattactttatacaaaagctttgacaaaagggatacttctcaat
ctcggcagtatctatgctcaagaaaaagggaattatattcgcttatcatatgcttatgca
tctcttgaagatcttcaaaagggaatttatgaattgggtttgatgattaaggaattggca
agcagataa

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