Bartonella ancashensis: PU02_0790
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Entry
PU02_0790 CDS
T04086
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
banc
Bartonella ancashensis
Pathway
banc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
banc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PU02_0790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
banc03021
]
PU02_0790
Transcription machinery [BR:
banc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PU02_0790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
mono-CXXC
Motif
Other DBs
NCBI-ProteinID:
ALE03604
UniProt:
A0A0M4M628
LinkDB
All DBs
Position
832111..834114
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AA seq
667 aa
AA seq
DB search
MATKVRQKVNTEAVDEKNSDSPPLDFSDDAIKKMVKLAQRNGYITMDELNAVLPSDSVTS
EQIEDILTMFSEMGVSVVDDEDDIESEHCEGEITAEGGSLVESAGREVATISKREVADRT
DDPVRMYLREMGAVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQALVIWREELKEQ
RILLREIIDLEITYAGPEAKQAPVIERERIDKIKEEISSSAPHDRDGIAGDVGAEDDEDD
EVNLSFAAMESELCPQVMETLDFIAETYVKLRKLQDQHVENSLADHNDGALSSAQKKKSV
QLKADLVQAVKSLSLNQNRIESLVEQLYSINKRLVHNEGKLKRIASNYGIGHDSFLKEYQ
GRELDSDWIDYISALPENGWKEFALREAEMIHDLRSEIQNLAQETAISIGEFRRIVMQVQ
KGEREATIAKKEMVEANLRLVISIAKKYTSRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQILHEIGREPTPEELSSK
LSMPLEKVQKVLKIAKEPISLETPVGDEDDSHLGDFIEDRNVLLPIDAAIQANLRDTTTR
VLSSLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRK
LRSFLDS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggttagacagaaagttaatacagaagcagtggatgagaagaattcggac
agtcctcctcttgatttttctgatgatgctatcaagaaaatggtgaagcttgctcaaaga
aacggttatatcacaatggatgagctaaacgcagttcttccttcggattctgttacatct
gagcaaattgaagatatattgaccatgttttctgaaatgggagtcagtgttgttgatgat
gaagatgatattgaatctgagcactgtgagggggagattactgcagaaggggggagttta
gtagaatctgctggtcgtgaagttgcaacaatatctaaacgggaagtagcggatagaacg
gatgatccggtgcgaatgtatctgcgtgagatgggtgctgttgaacttctttcacgtgaa
ggggagattgccattgctaaacgcattgaagcaggacgtgaaacgatgattgcaggactt
tgtgaaagtcctttaacgtttcaagctttagttatttggcgtgaagaactgaaagagcaa
cgtattcttcttcgtgaaattattgatcttgaaataacatatgcgggaccagaagctaag
caagctcccgttattgagcgagagcgaatagataaaataaaggaagagatatcatcttct
gctccacatgatagggacggtattgcaggagatgtaggtgctgaagatgatgaggacgat
gaggttaatttatcgttcgcagcaatggaaagtgagttgtgtcctcaagtaatggaaact
ttggatttcattgcggaaacctatgtgaaattgaggaaattgcaagatcaacatgttgag
aatagtttagctgaccataatgatggggctctttcgtctgctcaaaaaaagaaatctgtt
cagttgaaggcggatttggttcaggcggtgaagtctctttctttgaatcagaatcgtata
gaatctttggttgagcagctttatagtatcaataagaggcttgttcataacgaaggtaaa
ctaaaacggattgccagtaattacgggattgggcatgatagttttttgaaagagtatcaa
gggcgtgagttagattcagattggatcgattatatttctgctttgccagaaaatggttgg
aaggagtttgcactacgtgaagctgaaatgattcatgatttgcgtagcgaaatacaaaat
cttgcacaggaaacagctatttctataggagaatttcgtcggattgttatgcaagtgcaa
aagggtgagcgtgaagcaacgattgccaagaaagaaatggtagaggctaatttacgcctt
gtgatttcaattgcaaaaaaatacactagccgtggtttgcagttccttgatcttattcaa
gagggcaacatcggtttaatgaaggccgttgataaatttgaatatcgacgtggctacaag
ttttcgacttatgctacctggtggattcgtcaggcgattacacgttcaattgccgatcaa
gcgcgtactattcgtattcctgttcatatgattgagaccattaataagatcgttcgcaca
tcacgtcaaattttacatgagattgggcgtgagcctacaccagaggaattgtcaagcaag
ctttcgatgcctttggagaaagtgcagaaagttttaaaaattgcaaaagagccgatttct
ctcgaaactcctgttggagatgaagacgattctcatttaggtgattttatcgaagatagg
aatgtgctactaccgattgatgcggctattcaggctaatttacgtgacacaacaacacgt
gttctttcttcgttaacaccacgtgaagaacgcgttttacgaatgcgttttggtattgga
atgaatactgatcatacattagaggaagttggtcagcaattttcagtaacacgtgaacgt
attcgccaaattgaggcaaaagcacttcgtaaattgaaacatcctagtcgttcgcgtaaa
ttgcggagcttccttgattcctga
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