Borreliella andersonii: QIA45_01900
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Entry
QIA45_01900 CDS
T09475
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
band
Borreliella andersonii
Pathway
band03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
band00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QIA45_01900 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
band03021
]
QIA45_01900 (rpoB)
03400 DNA repair and recombination proteins [BR:
band03400
]
QIA45_01900 (rpoB)
Enzymes [BR:
band01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QIA45_01900 (rpoB)
Transcription machinery [BR:
band03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QIA45_01900 (rpoB)
DNA repair and recombination proteins [BR:
band03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QIA45_01900 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
WNY65847
UniProt:
A0ABZ0CEW2
LinkDB
All DBs
Position
complement(399575..403042)
Genome browser
AA seq
1155 aa
AA seq
DB search
MIKRVHLGQGRADEILDLPNLIEIQLNSYEKFLQLDKLKNKKPLLNEGLESVFRNIFPIK
SGNGDVALEYERYYIENDALNFTEKECKRKGQSYEAVLKVRLNLQFLTTGEIRQKDVYMG
TIPLMTERGTFIINGAERVVVSQIHRSPGVVFYKEKDLYSARIIPYRGSWLEFEIDSKKD
YLYVKIDRKKRILITLFLRALGFDTRERIIETFYNIKKIKVKDETKRDLPGQYLAKSINI
RENMYYRAGDKITLQDVEDFLQNGVNEIELVDFDGYDGVPGKCFVSSNVILNCLEKEDAF
FALKDGSKELPKESVMLAVYSSLFPGEPISIDNAENDLKTIFFSERRYDLGRVGRYKLSK
KFGFDDLTTSVLTMNDIVNTISHLLRIYEGHDILDDIDHLGNRRVRSVGELLTNIYKGAM
SRVEKIAKDRMSNKEVFNLKPQELISVKPIVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLE
TPYRKVVNGEVTDQLEYLSAIDEEKKCIAQANAAFNSNGKYLEDLVSVRISGDYTTTNPT
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPPIVGTGMESVV
AKDSGVVVKAKRSGEVILATSSKIVIKPFEAENAKDLDEYHIVKYERTNQDTCFNQSVLV
KEGQKVERGEIIADGPATRCGELALGNNLLLGVIPWNGFNYEDAILISDRIVKEDLYTSI
HIKEFSIEVRETKLGPEKVTGDIPNVSEKILNKLDENGIIRIGTYVKSGDILVGKVTPKS
EGDITPEFRLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLDESYNVPVFESATNEQIQEKLKKAGFNPTSKEILYDGYTGEPFENEV
MVGVIYMLKLHHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAH
TLQELLTVKSDDMSGRVKIYENIVKGVPTNVSGIPESFNVLMQELRGLGLDLSIYDDAGN
QVPLTEKEEELINKS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagagttcatctgggacaaggaagagctgatgagattttagacttacctaac
ctgatagaaatacaattaaattcttatgaaaaatttttacaacttgataaattaaaaaat
aaaaaacctttacttaatgagggccttgagtctgtttttagaaatatatttcccattaaa
agtggaaatggtgatgttgctcttgagtatgaaagatattatatagaaaacgatgccctt
aattttacagaaaaagaatgtaaaagaaaggggcaaagttatgaggctgttttaaaggta
agactgaatttgcaatttttgactactggggaaataaggcaaaaagacgtatacatggga
actattcctttaatgacagaaagaggcacttttattattaatggggcagagagggttgtt
gtttctcagattcatagatccccaggagttgttttttataaagaaaaagatttgtattct
gctagaataattccttatcgtggttcttggttagaatttgagattgattctaaaaaagat
tatctttatgtaaaaatagatagaaaaaaaagaatactcataactctttttttaagagct
ttggggtttgatacgagagaaagaataatagaaactttttacaacattaaaaaaattaaa
gttaaagacgagacaaaaagagatcttccagggcaatatttagccaagagtattaacata
agagagaatatgtattatcgagcaggagataaaattactctgcaagatgttgaagatttt
ttacaaaatggagtaaatgaaatagagcttgttgattttgatggttatgatggtgttcct
ggaaagtgctttgtaagttcgaatgttatattaaattgtcttgaaaaagaggatgcgttt
tttgctttaaaggatggctctaaagagcttccaaaagagtcagttatgctggctgtttat
agttctctttttcctggcgagccaatatcaattgataatgctgaaaacgatttaaaaacc
atattcttttctgaaagaagatatgatcttggacgtgtgggacgctataaactttctaaa
aaatttggatttgatgatttaaccacatctgttttaactatgaatgatattgttaatacc
atatcgcatcttttaagaatatatgaaggccatgatattcttgatgatattgaccattta
ggaaatagaagggttcgttctgttggtgagcttcttaccaatatatataaaggtgcgatg
tcaagagttgaaaaaattgctaaagatagaatgtctaacaaggaagtttttaatctaaag
cctcaagaattaataagcgttaaacctattgtatctgctgttaaagaattttttgcaacc
agtcagctttcacagtttatggatcaagtcaatcctttggctgagcttactcacaaaagg
cgtcttaatgctcttggaccaggagggctttcaagagatagggcaggatttgaagtaaga
gacgtacattatactcattatggtagaatgtgtcctattgaaactcctgaagggccaaat
attggacttattgtttctttggctacttactctagagttaatgattatggttttttagaa
actccttataggaaagttgttaatggagaggtgactgatcaattggaatatttatctgct
attgacgaggagaaaaagtgcattgctcaggctaatgctgcttttaattctaatggaaag
tatcttgaagatttagtttctgttagaatttctggtgattatacaacaacaaaccccaca
aatatagactacatggatgtttctcctaggcagttaatttcagtatcttcggcgttaatt
ccttttcttgaacacaatgatgcaaatcgggctcttatgggttctaatatgcaaagacaa
gcagtgcccctgctttttcccaagcctcctattgttggtacaggtatggaaagtgttgtt
gcaaaggattcgggagtagttgttaaggctaaaagaagtggggaagttattcttgcaaca
agcagtaagatagttattaaaccttttgaggcagagaatgctaaggatttagatgaatat
catattgttaagtatgaaaggacaaatcaggatacctgttttaatcaatccgttttagtt
aaagagggtcaaaaggttgaaaggggcgagataatagctgatggtcctgctaccaggtgt
ggagaacttgctcttggtaataatttattgctgggggttattccttggaatggatttaat
tatgaggatgctatattgatttctgatagaattgtaaaggaagatctttacacatctatt
catatcaaagaatttagtatagaggtaagagaaactaaacttggccctgagaaagttaca
ggagatatacctaatgttagcgaaaagatactaaacaaattggatgaaaatgggattata
cggataggaacttatgtaaagtctggtgatattctggttggtaaggttactccaaagtca
gaaggagacattactcctgaatttagactgttaacttctatttttggagaaaaagcaaag
gatgttaaaaataattcattaaaagttcctcatggtactgaaggtacagttattgatgta
caaaggattactaaagaggatgttggcaatctttctcctggagttgaggagatacttaaa
gtttatgttgccaaaaaaagaaagcttaaagaaggcgataaaatggctggacgacatggc
aataagggtgttgttgcaaagattcttcctgttgaagatatgccttatcttgcggatgga
acccctcttgatatatgcttaaatcctttgggagttccatctagaatgaatatcggacag
ttaatggaatctcaattaggtcttgctggtaaatatcttgatgaatcttataatgttcct
gtttttgaatctgctacaaatgaacaaattcaggaaaaattaaaaaaagctggatttaat
ccaacttctaaagaaattttatatgatggttatacaggagaaccgttcgaaaatgaagta
atggttggggtgatttacatgcttaaactacatcaccttgttgatgataaaatgcacgca
agatcaacaggtccatattctcttgtttctcaacagcctcttggaggaaaggctcaattt
ggtgggcaaagacttggagagatggaggtttgggctcttgaagcttatggtgcagcgcac
acgcttcaagaacttttaacagttaaatctgatgatatgtcaggcagggttaagatatat
gaaaatatagtaaaaggtgttcctactaatgtatcggggattcctgaatcttttaatgtt
ttaatgcaagagcttagaggacttggacttgatttatcaatttatgatgatgctgggaat
caggttcctttgacagaaaaagaagaagaattgattaataaaagctag
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