Bartonella apis: BBC0122_009710
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Entry
BBC0122_009710 CDS
T05086
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bapi
Bartonella apis
Pathway
bapi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bapi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBC0122_009710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bapi03021
]
BBC0122_009710
03400 DNA repair and recombination proteins [BR:
bapi03400
]
BBC0122_009710
Enzymes [BR:
bapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBC0122_009710
Transcription machinery [BR:
bapi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBC0122_009710
DNA repair and recombination proteins [BR:
bapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBC0122_009710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF507
HTH_NPRL3
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AQT47093
UniProt:
A0A1U9MH77
LinkDB
All DBs
Position
1110243..1114382
Genome browser
AA seq
1379 aa
AA seq
DB search
MAQTLSFNGRRRVRKVFGKIPEVAKMPNLIEVQKASYDQFLMVDEPKGGRKDEGLQAVFK
SVFPITDFSGASMLEFVRYEFDPPKFDVEECRQRDLTYAAPLKVTLRLIVFDIDEDTGSK
DIKDIKEQDVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARIIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSILMALGMDGQEILSTFYNTVTFKR
AKDGWRIPYSAERYKGMKLLADLVDADTGEVVAQAGKKLTARAAKQLVEKGLKEIKATED
DLYGSYLAEDIVNYETGEIYLEAGDEIDEKTLQVLLDQNVDEINVLDIDHVNIGAYIRNT
LAADKNQSRQDALFDIYRVMRPGEPPTLETAEAMFNSLFFDPERYDLSAVGRVKMNMRLD
LDCPDTIRILRKEDILAVVKTLVELRDGRGEIDDIDNLGNRRVRAVGELMENQYRIGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKIIDGKVTREVVYLSAMEESKHYVAQANSNLSDDGKFVDEFVVCRHANEVLMAPRENI
DLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPIVAR
DSGAAIAAKRGGIVDQVDATRIVIRATQDLDPTKSGVDIYRLHKFQRSNQSTCINQRPLV
RVGDHIEKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDAVLLSERMVAEDVFTSI
HIEEYEVSARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGAFGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQSILDRSVYARLVDMLNGKTAIEGPKGFKKGTSLTEAVMKEFPRSQWW
QFAVEDEKLQGEIEALRKQYDESKDALQRRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRILPIEDMPFLADGTHADIVLNPLGVPSRMNVGQILETHLG
WACAGIGKQIGDLLEAYRKGGDIKPLRQRIEDIIPDNDRNEPIREYDDPSIVRLADQMSH
GVSISTPVFDGAHDADINEMLKEAGLATSGQVQLFDGRTGEPFDRQVTVGYIYMLKLHHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELDDTRELLAQQQNLPDAAE
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctttcatttaatggtcgcaggcgcgtgcgcaaggtattcggaaagatt
cccgaagtggccaagatgccgaaccttattgaggttcaaaaggcttcttatgaccaattc
ctgatggttgatgaaccaaaagggggaagaaaagacgaaggcttgcaagcagtattcaag
tcggtatttccgataacggatttttcgggtgcatccatgctcgaattcgtccgttacgaa
tttgatccaccaaagttcgacgttgaagaatgtcggcaacgcgatcttacatatgcggca
cctcttaaggtgacgctgcgtttgatcgtatttgatattgatgaagataccggttccaaa
gatattaaagatatcaaggagcaagatgtctatatgggtgatatgccccttatgacagat
aacggtacgtttatcgtcaacggtacggaacgtgttatcgtatcccagatgcaccgctca
ccgggtgtattcttcgatcacgataagggaaaatcccattcttccggcaaactgttgttt
gctgctcgtatcattccatatcgtggttcatggctcgacatcgaattcgatgccaaggat
attgtttacgcacgtattgatcggcgccgcaagatacctgtcacaagtattctgatggcg
ctcggaatggatggacaggaaatcctgtcgacattctataatacggttactttcaaacgt
gccaaagatggttggcgcattccttattcggctgaacgctataagggaatgaagttgctg
gctgatcttgttgatgccgatacgggtgaagttgtagcacaggcaggcaaaaagctcaca
gctcgtgcggcaaagcaacttgtcgaaaaagggttgaaagagatcaaggcgacagaagac
gatctttatggttcctatctggccgaagatattgtcaattacgaaaccggtgaaatctat
cttgaagccggtgacgagattgacgaaaagactcttcaggttttgcttgaccagaatgtc
gacgaaatcaatgttctcgatatcgaccatgtcaatatcggtgcatatattcgcaacaca
ctcgcggctgacaaaaatcagagccggcaggatgcattgttcgatatttatcgtgttatg
cgccctggcgaaccgcccacacttgaaacagccgaagcgatgttcaattcgctgttcttt
gatccggagcgctatgatctttcggccgtcggtcgcgtaaagatgaacatgcgtcttgat
cttgattgtccggatacgatccgcattttgcgcaaagaagatattctggcagttgtcaag
acacttgtcgaactgcgtgatggtcgtggtgaaatcgacgatattgataacctcggtaac
cgtcgtgtccgcgctgtcggcgaattgatggaaaaccagtatcgtatcggtctgttgagg
atggaacgcgccatcaaggagcgtatgtcttcaatcgagatcgacacggttatgccgcaa
gatcttatcaatgccaaaccggctgctgctgctgtgcgtgaattcttcggatcgtcgcag
ttgtcgcaatttatggatcagaccaatccgctttcggaaattacccataagcggcgtctg
tcggcattgggaccgggtggtcttacccgcgaacgtgccggtttcgaggttcgcgacgtg
catccgacccattatggtcgtatctgcccgattgaaacaccggaaggtccgaatatcggt
cttatcaactcgcttgcaacatttgcccgtgtcaacaaatatggatttattgaaagtccg
tatcgcaagatcattgatggcaaagttacacgcgaagtcgtttatctttcggctatggaa
gagtccaagcactatgtggcacaggcaaattccaacctgtcggatgacggcaaatttgtt
gatgaattcgtcgtttgtcgtcatgccaacgaagtgttgatggcaccgcgcgagaatatc
gacctcatggacgtttcgccgaagcagttggtttctgttgctgcagcgcttattccgttc
ctcgaaaacgacgacgcgaaccgcgctttgatgggttccaacatgcaacgtcaggctgtg
cctctggttcgcgccgaagcaccgtttgtcggaaccggtatggaaccgattgttgcccgt
gactccggtgctgcaattgcagccaaacgaggtggcattgtcgatcaggttgacgcaacg
cgtattgttattcgtgcaacacaggatcttgacccgaccaaatcgggtgtggatatttat
cgtttgcacaaattccagcgctccaaccagtcgacctgtatcaaccagcgtcctttggtt
cgcgttggcgaccatatcgaaaagggcgatatcattgctgatggtccgtcgaccgatctc
ggtgatctggctcttggtcgtaacgttctcgtcgcgttcatgccttggaacggctataac
tatgaagatgctgttctgttgtccgaacggatggttgcagaagatgtattcacctcgatc
catatcgaggaatacgaagtttctgcccgtgatacgaaacttggaccggaagagatcaca
cgtgatattccgaatgtttcggaagaagcactgaagaacctcgatgaagccggcattgtt
tatatcggtgccgaagttcaacccggtgatattctcgttggcaagatcacgccgaagggt
gaaagcccgatgacaccggaagagaaactcttgcgagctatcttcggtgaaaaggcttcc
gatgttcgtgatacgtcaatgcgtatgcctccgggggcattcggtacagtcgttgaagtt
cgtgttttcaatcgccacggcgttgaaaaggacgaacgtgcaatggctatcgaacgtgaa
gaaatcgagcgtttggcgaaagaccgtgatgacgaacagtccattctggaccgcagcgtt
tatgcacgccttgtcgatatgctgaatggaaaaacggctattgaagggcctaagggcttc
aagaaaggcacaagccttactgaagctgtcatgaaagagtttccgcgttcacagtggtgg
caattcgccgtcgaggatgaaaagcttcagggtgaaatcgaagcattgcgcaagcaatac
gacgaatccaaggatgctctccagcgtcgcttcatggacaaggttgaaaaagtccagcgt
ggtgacgaaatgcctccgggtgtcatgaagatggtcaaggtttttgttgctgttaagcgc
aaaatccagccgggtgacaagatggccggtcgccatggtaacaagggtgttgtttcgcgc
attctgccgattgaagacatgccgttccttgcagatggtacacatgccgatatcgtgttg
aaccctctgggcgttccgagccgaatgaatgtcgggcaaattctcgaaacccaccttggt
tgggcttgtgccggtattggcaagcagataggcgatttgttggaagcttatcgtaaaggc
ggagacatcaagccgttacgtcaacggatcgaggatattattcccgataatgaccgtaac
gagccgatccgcgaatacgatgatccaagcattgttcgccttgccgaccagatgagccat
ggtgtgtcgatttcgacaccggttttcgatggtgcacatgatgccgacatcaacgaaatg
ttgaaagaagcaggacttgcaacatcgggtcaggttcaactgtttgatggccgtaccggt
gaacctttcgatcgtcaggtgacagtgggctatatttatatgctcaaactgcaccatctg
gttgatgacaagattcacgcccgttcgatcggaccttactcgcttgttacccagcaaccg
ttgggtggtaaagcacagttcggtggtcaacgtttcggcgagatggaggtctgggcactt
gaagcttatggtgccgcttacaccttgcaggaaatgctgacagtgaagtctgacgacgtt
gccggacgtaccaaagtttacgaagctattgttcgtggcgatgatacgtttgaagccggc
ataccggaaagcttcaacgttctggttaaggaaatgcggtctcttgggcttaatgtcgag
cttgatgatacgcgtgaattattggctcagcagcaaaacttgccggatgcagccgagtaa
DBGET
integrated database retrieval system
